RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 TMA7Q9Y2S6 64 aaKnown RBP3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 PCNTO95613 3336 aa3.84□□□□□ -1.79
PCDH11X-208ENST00000504220 ZMYM6O95789 1325 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ARAP2Q8WZ64 1704 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SLX4Q8IY92 1834 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 TARM1B6A8C7 271 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 PI4K2BG5E9Z4 385 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 TNFRSF10BO14763 440 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 RASGRF2O14827 1237 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ADAM11O75078 769 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 GPC4O75487 556 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 USP17L8P0C7I0 530 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 CD58P19256 250 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 S100A1P23297 94 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 AXLP30530 894 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SSTR3P32745 418 aaPredicted RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP1R2P41236 205 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 YARSP54577 528 aaKnown RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 MAGOHP61326 146 aaKnown RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 RNASELQ05823 741 aaKnown RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC36Q1X8D7 754 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SGO2Q562F6 1265 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 LGSNQ5TDP6 509 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 C9orf131Q5VYM1 1079 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 PLEKHA7Q6IQ23 1121 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ALKBH5Q6P6C2 394 aaKnown RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SUSD1Q6UWL2 747 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC51AQ86UW1 340 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 NLRP14Q86W24 1093 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 RALGPS2Q86X27 583 aaPredicted RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SULF1Q8IWU6 871 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SRRM1Q8IYB3 904 aaKnown RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 LINC00518Q8N0U6 118 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 LCORLQ8N3X6 602 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 P2RX5Q93086 422 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM149B1Q96BN6 582 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ITPKCQ96DU7 683 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF668Q96K58 619 aaPredicted RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 CNDP1Q96KN2 507 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 TTC1Q99614 292 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 CHP1Q99653 195 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 WACQ9BTA9 647 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 APOL6Q9BWW8 343 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SMYD3Q9H7B4 428 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 ACTR5Q9H9F9 607 aaPredicted RBP3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 SCUBE2Q9NQ36 999 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 KRT82Q9NSB4 513 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 HDAC9Q9UKV0 1011 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 COMMD3-BMI1R4GMX3 469 aa3.84□□□□□ -1.8
PCDH11X-208ENST00000504220 AOX1Q06278 1338 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DUOX1Q9NRD9 1551 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ERVH48-1M5A8F1 160 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJC6O75061 913 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TOM1L1O75674 476 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TJP3O95049 919 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CRYZL1O95825 349 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP17A1P05093 508 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 INHBAP08476 426 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 KITP10721 976 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PLCG1P19174 1290 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NCF2P19878 526 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 M6PRP20645 277 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PON1P27169 355 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC5A2P31639 672 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CDH5P33151 784 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PTDSS1P48651 473 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ACADVLP49748 655 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 HK2P52789 917 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NKX2-5P52952 324 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 EPHB1P54762 984 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ITKQ08881 620 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 NFX1Q12986 1120 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TOB2Q14106 344 aaPredicted RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 GIT2Q14161 759 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MMEL1Q495T6 779 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SPDYE2Q495Y8 402 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SEZ6L2Q6UXD5 910 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 USP49Q70CQ1 688 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TRMT10CQ7L0Y3 403 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 EEPD1Q7L9B9 569 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MIER3Q7Z3K6 550 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ZC3H18Q86VM9 953 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 RHOT2Q8IXI1 618 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CCDC36Q8IYA8 594 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 C7orf31Q8N865 590 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 ATP6V0D2Q8N8Y2 350 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 TOR1AIP2Q8NFQ8 470 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CCHCR1Q8TD31 782 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PPP4R1Q8TF05 950 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 POMGNT1Q8WZA1 660 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 LARP4BQ92615 738 aaKnown RBP3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 MASTLQ96GX5 879 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FGD4Q96M96 766 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 CMTM3Q96MX0 182 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PHF12Q96QT6 1004 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 PIGSQ96S52 555 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FMO2Q99518 471 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 SIKE1Q9BRV8 207 aa3.83□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM117AQ9C073 453 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms