RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 UPP2O95045 317 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 MAPTP10636 758 aaKnown RBP17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 STX5Q13190 355 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 USP13Q92995 863 aaPredicted RBP17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM162AQ96A26 154 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 RBBP8Q99708 897 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 TMBIM4Q9HC24 238 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 FAM205AQ6ZU69 1335 aa17.15■□□□□ 0.34
PCDHA1-203ENST00000504120 MRNIPQ6NTE8 343 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 ADCK2Q7Z695 626 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 VPS37AQ8NEZ2 397 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 EPS8L3Q8TE67 593 aaKnown RBP17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 WNK4Q96J92 1243 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 MROH8Q9H579 483 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 SLC40A1Q9NP59 571 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 TMEM161AQ9NX61 479 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 SALL3Q9BXA9 1300 aa17.14■□□□□ 0.34
PCDHA1-203ENST00000504120 LOC100653049A0A140TA62 436 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 KRT34O76011 436 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 FKBP9O95302 570 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 FKBP9P1Q75LS8 142 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ZNF571Q7Z3V5 609 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 TMCO5AQ8N6Q1 288 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 FAR2Q96K12 515 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 CYP3A43Q9HB55 503 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 PCDHB7Q9Y5E2 793 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 GPR182O15218 404 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 STX7O15400 261 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 TIMM44O43615 452 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 SERPIND1P05546 499 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ATICP31939 592 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC11A2P49281 568 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 NEK2P51955 445 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 BCAT1P54687 386 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 POU4F1Q01851 419 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 DENND5BQ6ZUT9 1274 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 TXNRD3Q86VQ6 643 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 CCDC126Q96EE4 140 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 AGO4Q9HCK5 861 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ADGRA2Q96PE1 1338 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 PMPCBO75439 489 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 H2AFXP16104 143 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 GTF2A2P52657 109 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 OTUD4Q01804 1114 aaKnown RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 FAXCQ5TGI0 409 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 CYGBQ8WWM9 190 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 PXMP2Q9NR77 195 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ABI2Q9NYB9 513 aaPredicted RBP17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ARHGAP20Q9P2F6 1191 aa17.14■□□□□ 0.33
PCDHA1-203ENST00000504120 ARHGEF9O43307 516 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 ACO1P21399 889 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 PPP3CCP48454 512 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SERPINB8P50452 374 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CCNG2Q16589 344 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CNPY3Q9BT09 278 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 COLEC11Q9BWP8 271 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 LACRTQ9GZZ8 138 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SALL1Q9NSC2 1324 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 KLK14Q9P0G3 267 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 HEATR9A2RTY3 570 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 MYO1GB0I1T2 1018 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TRIM66O15016 1216 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 DEAF1O75398 565 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 RRM1P23921 792 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CORO7P57737 925 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TIGD7Q6NT04 549 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TAS1R2Q8TE23 839 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 C17orf80Q9BSJ5 609 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 STAG3L1P0CL83 205 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 GYS1P13807 737 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CLCN3P51790 818 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 WASHC5Q12768 1159 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TTLL9Q3SXZ7 439 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 GLRA4Q5JXX5 417 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 C11orf63Q6NUN7 778 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SPOCD1Q6ZMY3 1216 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SLFN11Q7Z7L1 901 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 UNC45BQ8IWX7 931 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SUGP1Q8IWZ8 645 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 PRPF18Q99633 342 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 SELENONQ9NZV5 590 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TCRBV5S4A2TA0A5A2 114 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CAND2O75155 1236 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 FBXO21O94952 628 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 TCN1P20061 433 aaPredicted RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 LRRC74AQ0VAA2 488 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 R3HDM1Q15032 1099 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 FAM172AQ8WUF8 416 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 UBE2OQ9C0C9 1292 aaKnown RBP17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 CRLS1Q9UJA2 301 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
PCDHA1-203ENST00000504120 C2orf81A6NN90 581 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 EVPLLA8MZ36 301 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 IL1R1P14778 569 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 PTPN7P35236 360 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 SKOR1P84550 965 aa17.12■□□□□ 0.33
PCDHA1-203ENST00000504120 SLC15A2Q16348 729 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms