RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 SLC26A3P40879 764 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ETV4P43268 484 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CDR2Q01850 454 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PTK2BQ14289 1009 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 C1orf141Q5JVX7 400 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ATAD3BQ5T9A4 648 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 HS2ST1Q7LGA3 356 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PATL1Q86TB9 770 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SERINC5Q86VE9 423 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 C3orf58Q8NDZ4 430 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ARHGEF2Q92974 986 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SCYL1Q96KG9 808 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 EYA3Q99504 573 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SORT1Q99523 831 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 LRRC1Q9BTT6 524 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DRC3Q9H069 523 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CSRNP2Q9H175 543 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CWH43Q9H720 699 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PLSCR2Q9NRY7 297 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ATAD3AQ9NVI7 634 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNHIT2Q9UHR6 403 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 APOBEC2Q9Y235 224 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TTLL3Q9Y4R7 772 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 IQANK1A0A1B0GTG1 560 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DPPA5A6NC42 116 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF233A6NK53 670 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KCNJ18B7U540 433 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 RASA4BC9J798 803 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 RASA4O43374 803 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TBCAO75347 108 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 UBOX5O94941 541 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT18P05783 430 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 L1CAMP32004 1257 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 RARRES1P49788 294 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NR1H2P55055 460 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MTTPP55157 894 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MAGOHP61326 146 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KCNJ12Q14500 433 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MAN2A1Q16706 1144 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CDKL4Q5MAI5 379 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CYHR1Q6ZMK1 362 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NCCRP1Q6ZVX7 275 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT25Q7Z3Z0 450 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NET1Q7Z628 596 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 FAM228AQ86W67 206 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM126BQ8IUX1 230 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SLF2Q8IX21 1173 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 DIS3L2Q8IYB7 885 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MINDY2Q8NBR6 621 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADAMTS16Q8TE57 1224 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 RASSF5Q8WWW0 418 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 APBB2Q92870 758 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ATP6V0A1Q93050 837 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MAGOHBQ96A72 148 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SNF8Q96H20 258 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TBATAQ96M53 351 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TTC25Q96NG3 672 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 FHDC1Q9C0D6 1143 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADAM7Q9H2U9 754 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PIH1D1Q9NWS0 290 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 GID8Q9NWU2 228 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADAM22Q9P0K1 906 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MAN1B1Q9UKM7 699 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NFU1Q9UMS0 254 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 L3MBTL1Q9Y468 752 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 WTIPA6NIX2 430 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 F8W031 263 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PITPNM1O00562 1244 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 XPO1O14980 1071 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MCF2LO15068 1137 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 PEX1O43933 1283 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MTRF1O75570 445 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 STK10O94804 968 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SLITRK3O94933 977 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CHRNA3P32297 505 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 KRT6CP48668 564 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 METAP2P50579 478 aaKnown RBP eCLIP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 AP2B1P63010 937 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZBTB16Q05516 673 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TRPC3Q13507 836 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TDRD12Q587J7 1177 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZNF720Q7Z2F6 126 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 STAG2Q8N3U4 1231 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 FBXO25Q8TCJ0 367 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MAELQ96JY0 434 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TSGA13Q96PP4 275 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 UHRF1Q96T88 793 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 OLFM1Q99784 485 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TSG101Q99816 390 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ELAC2Q9BQ52 826 aaKnown RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZSWIM1Q9BR11 485 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ASPSCR1Q9BZE9 553 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 NACAP1Q9BZK3 213 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ADAMTS10Q9H324 1103 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 LRRC19Q9H756 370 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 CUEDC1Q9NWM3 386 aaPredicted RBP2.92□□□□□ -1.94
NEDD4-204ENST00000503468 ZDHHC7Q9NXF8 308 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 MARK1Q9P0L2 795 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 TMEM9Q9P0T7 183 aa2.92□□□□□ -1.94
NEDD4-204ENST00000503468 SEC63Q9UGP8 760 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms