RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 CCDC42Q96M95 316 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 INTS2Q9H0H0 1204 aaKnown RBP17.16■□□□□ 0.34
LMNA-217ENST00000498722 SDCBP2Q9H190 292 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 DPEP3Q9H4B8 488 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 DEF6Q9H4E7 631 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 SIX2Q9NPC8 291 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 CRTAC1Q9NQ79 661 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 AIPL1Q9NZN9 384 aa17.16■□□□□ 0.34
LMNA-217ENST00000498722 MYO16Q9Y6X6 1858 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 EIF3CLB5ME19 914 aaKnown RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 PAPLNO95428 1278 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 MYL4P12829 197 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 CD58P19256 250 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 CYP2F1P24903 491 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 ASPAP45381 313 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 RAPGEF1Q13905 1077 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 PDZD4Q76G19 769 aaPredicted RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 SCN4BQ8IWT1 228 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 PLCD3Q8N3E9 789 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 TXLNBQ8N3L3 684 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 MYLPFQ96A32 169 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 EIF3CQ99613 913 aaKnown RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 DESI2Q9BSY9 194 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 ASAH2Q9NR71 780 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 HSFX1Q9UBD0 423 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 USTQ9Y2C2 406 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 MRPS23Q9Y3D9 190 aaKnown RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
LMNA-217ENST00000498722 BZW2Q9Y6E2 419 aaKnown RBP17.15■□□□□ 0.34
LMNA-217ENST00000498722 CCDC172P0C7W6 258 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 HAPLN1P10915 354 aaPredicted RBP17.14■□□□□ 0.33
LMNA-217ENST00000498722 PTPN1P18031 435 aaKnown RBP17.14■□□□□ 0.33
LMNA-217ENST00000498722 NDST1P52848 882 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 ORC1Q13415 861 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 SPA17Q15506 151 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 ITIH5Q86UX2 942 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 RNF135Q8IUD6 432 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 HS6ST3Q8IZP7 471 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 B3GALNT2Q8NCR0 500 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 GPR152Q8TDT2 470 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 GIPC2Q8TF65 315 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 TNIP3Q96KP6 325 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 LPIN3Q9BQK8 851 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 MED10Q9BTT4 135 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.14■□□□□ 0.33
LMNA-217ENST00000498722 APEX2Q9UBZ4 518 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 NME7Q9Y5B8 376 aa17.14■□□□□ 0.33
LMNA-217ENST00000498722 ANAPC1Q9H1A4 1944 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ATF6P18850 670 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 BDNFP23560 247 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 STAT1P42224 750 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 TDRD12Q587J7 1177 aaKnown RBP17.13■□□□□ 0.33
LMNA-217ENST00000498722 SDHAF4Q5VUM1 108 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 FAM171BQ6P995 826 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ZNF662Q6ZS27 426 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ACOT1Q86TX2 421 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ACRBPQ8NEB7 543 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ITFG1Q8TB96 612 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 MYCBPAPQ8TBZ2 947 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 PCED1BQ96HM7 432 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 FAM81BQ96LP2 452 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 MYADMQ96S97 322 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 STK33Q9BYT3 514 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 BCO2Q9BYV7 579 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 DNAI2Q9GZS0 605 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 CYP3A43Q9HB55 503 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 COQ4Q9Y3A0 265 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 PAXBP1Q9Y5B6 917 aa17.13■□□□□ 0.33
LMNA-217ENST00000498722 NUP210Q8TEM1 1887 aaPredicted RBP17.12■□□□□ 0.33
LMNA-217ENST00000498722 ZNF197O14709 1029 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 AKR1B10O60218 316 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 FERP16591 822 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 ANXA13P27216 316 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 GRIK1P39086 918 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 GPR15P49685 360 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 JAM2P57087 298 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 RPL10AP62906 217 aaKnown RBP17.12■□□□□ 0.33
LMNA-217ENST00000498722 KLHL30Q0D2K2 578 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 DDR2Q16832 855 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 SLC5A9Q2M3M2 681 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 CFAP221Q4G0U5 840 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 ARHGAP29Q52LW3 1261 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 DNAJB7Q7Z6W7 309 aaPredicted RBP17.12■□□□□ 0.33
LMNA-217ENST00000498722 STKLD1Q8NE28 680 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 KIF18AQ8NI77 898 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 LMO3Q8TAP4 145 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 FGF13Q92913 245 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 TATDN2Q93075 761 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 PSMG2Q969U7 264 aa17.12■□□□□ 0.33
LMNA-217ENST00000498722 FUBP3Q96I24 572 aaKnown RBP eCLIP17.12■□□□□ 0.33
LMNA-217ENST00000498722 LUC7LQ9NQ29 371 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms