RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 WEE2P0C1S8 567 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 TMEM191BP0C7N4 346 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SESN3P58005 492 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 MRPS35P82673 323 aaKnown RBP17.17■□□□□ 0.34
COL6A1-206ENST00000498614 OGDHQ02218 1023 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 MORF4L2Q15014 288 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 THEMIS2Q5TEJ8 643 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 FYB2Q5VWT5 728 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 TXNRD3NBQ6F5E7 133 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 DNAJC24Q6P3W2 148 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 ZPBP2Q6X784 338 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 DSTYKQ6XUX3 929 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 ZBTB10Q96DT7 871 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 MRPL4Q9BYD3 311 aaKnown RBP17.17■□□□□ 0.34
COL6A1-206ENST00000498614 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 DCLRE1BQ9H816 532 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 SLC24A2Q9UI40 661 aa17.17■□□□□ 0.34
COL6A1-206ENST00000498614 OSTNP61366 133 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 TFAMQ00059 246 aaKnown RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 GAD2Q05329 585 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 TSNAXIP1Q2TAA8 658 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CYP4A22Q5TCH4 519 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 GPAT2Q6NUI2 795 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 DCUN1D2Q6PH85 259 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 APBB1IPQ7Z5R6 666 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF276Q8N554 614 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 NMRK1Q9NWW6 199 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 PRKCBP05771 671 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CALRP27797 417 aaKnown RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CETN2P41208 172 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 MXRA7P84157 204 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 LAMTOR4Q0VGL1 99 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 MUM1Q2TAK8 710 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 EFHC2Q5JST6 749 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CENPUQ71F23 418 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CDR2LQ86X02 465 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 RCOR2Q8IZ40 523 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 ZNF333Q96JL9 665 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 ACO2Q99798 780 aaKnown RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 LBHD1Q9BQE6 289 aaPredicted RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 NIF3L1Q9GZT8 377 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 ARL8BQ9NVJ2 186 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 RPL26L1Q9UNX3 145 aaKnown RBP17.16■□□□□ 0.34
COL6A1-206ENST00000498614 KCNH4Q9UQ05 1017 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CLUHO75153 1309 aa17.16■□□□□ 0.34
COL6A1-206ENST00000498614 CXCL11O14625 94 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 ZWINTO95229 277 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 ARIH2O95376 493 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 CALB1P05937 261 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 EDNRBP24530 442 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 GEMIN4P57678 1058 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TRPC3Q13507 836 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TFDP1Q14186 410 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 WDR72Q3MJ13 1102 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 PPP1R2P3Q6NXS1 205 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TMEM154Q6P9G4 183 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 DRICH1Q6PGQ1 229 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TFAP2BQ92481 460 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 RBM41Q96IZ5 413 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 RABGEF1Q9UJ41 708 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 LRRD1A4D1F6 860 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 SIGLEC16A6NMB1 481 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 GOLGA8RI6L899 631 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 OGTO15294 1046 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 NVLO15381 856 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TJP3O95049 919 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 LMNAP02545 664 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 GJB1P08034 283 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TROVE2P10155 538 aaKnown RBP eCLIP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 EFNA5P52803 228 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 AP3M2P53677 418 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 KLC1Q07866 573 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 GRM1Q13255 1194 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 DUOXA2Q1HG44 320 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 METTL7BQ6UX53 244 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 THNSL1Q8IYQ7 743 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 WDTC1Q8N5D0 677 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TMEM35BQ8NCS4 154 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 PTCD3Q96EY7 689 aaKnown RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 PRR11Q96HE9 360 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 KLF6Q99612 283 aaPredicted RBP17.15■□□□□ 0.34
COL6A1-206ENST00000498614 TMEM121Q9BTD3 319 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 MAF1Q9H063 256 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 SPATC1LQ9H0A9 340 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 SLC17A7Q9P2U7 560 aa17.15■□□□□ 0.34
COL6A1-206ENST00000498614 CEP350Q5VT06 3117 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 A0A0G2JND7 137 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 TCRBV5S1A1TA0A578 114 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 CFAP69A5D8W1 941 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 IFNB1P01574 187 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 CYP2C8P10632 490 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 SSTR1P30872 391 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 VCPP55072 806 aaKnown RBP17.14■□□□□ 0.33
COL6A1-206ENST00000498614 INHBEP58166 350 aa17.14■□□□□ 0.33
COL6A1-206ENST00000498614 LBRQ14739 615 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms