RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 GCNT4Q9P109 453 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 HMGXB4Q9UGU5 601 aa17.15■□□□□ 0.34
NR1H3-227ENST00000498548 TRAV19A0A0A6YYK7 116 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 GADD45BO75293 160 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-227ENST00000498548 ABL1P00519 1130 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
NR1H3-227ENST00000498548 CTHP32929 405 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 MAGEA9P43362 315 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 RPS9P46781 194 aaKnown RBP17.14■□□□□ 0.33
NR1H3-227ENST00000498548 NDST1P52848 882 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF658Q5TYW1 1059 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-227ENST00000498548 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.33
NR1H3-227ENST00000498548 TAS1R2Q8TE23 839 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 SMARCE1Q969G3 411 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 FAM83CQ9BQN1 747 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 RMND1Q9NWS8 449 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 ZMYM5Q9UJ78 669 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 MYO15AQ9UKN7 3530 aa17.14■□□□□ 0.33
NR1H3-227ENST00000498548 ATG2BQ96BY7 2078 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 OTOL1A6NHN0 477 aaPredicted RBP17.13■□□□□ 0.33
NR1H3-227ENST00000498548 CKMP06732 381 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 USP17L7P0C7H9 530 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 P4HA1P13674 534 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 CCDC130P13994 396 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 HDCP19113 662 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 ASPAP45381 313 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
NR1H3-227ENST00000498548 PLCB2Q00722 1185 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 TAF10Q12962 218 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 RUNX3Q13761 415 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 GAS6Q14393 721 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 ITPRIPL2Q3MIP1 535 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 ANKRD40Q6AI12 368 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 FAM35AQ86V20 835 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 ELOVL4Q9GZR5 314 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 CHRDQ9H2X0 955 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 TRPM5Q9NZQ8 1165 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 DMDP11532 3685 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 FANCMQ8IYD8 2048 aa17.13■□□□□ 0.33
NR1H3-227ENST00000498548 HELZP42694 1942 aaKnown RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TRIM49BA6NDI0 452 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 SOBPA7XYQ1 873 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 CETN3O15182 167 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 SMC2O95347 1197 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 MLLT6P55198 1093 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 ZXDBP98169 803 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 MTF1Q14872 753 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 EDRF1Q3B7T1 1238 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 CC2D1AQ6P1N0 951 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 RALGPS2Q86X27 583 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 SH3RF2Q8TEC5 729 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TAF4BQ92750 862 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 SEMA4DQ92854 862 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TNIP3Q96KP6 325 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TIGD1Q96MW7 591 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 GSDMAQ96QA5 445 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 TTLL2Q9BWV7 592 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 RNF38Q9H0F5 515 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 CHORDC1Q9UHD1 332 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-227ENST00000498548 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
NR1H3-227ENST00000498548 USP34Q70CQ2 3546 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF840PA6NDX5 716 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 AP1G2O75843 785 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 BEST1O76090 585 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 CD58P19256 250 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 NOP14P78316 857 aaKnown RBP17.11■□□□□ 0.33
NR1H3-227ENST00000498548 ZNF77Q15935 545 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 NAIF1Q69YI7 327 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-227ENST00000498548 Q6ZS52 159 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 FUKQ8N0W3 1084 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 NUP93Q8N1F7 819 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 SCAMP5Q8TAC9 235 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 SPATA20Q8TB22 786 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 SLC2A14Q8TDB8 520 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 CEP295NLQ96MC4 621 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 SMOQ99835 787 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 LINC00597Q9H2U6 94 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 TMEM8AQ9HCN3 771 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 DUS2Q9NX74 493 aaKnown RBP17.11■□□□□ 0.33
NR1H3-227ENST00000498548 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 FBXO4Q9UKT5 387 aa17.11■□□□□ 0.33
NR1H3-227ENST00000498548 EPB41P11171 864 aaKnown RBP17.1■□□□□ 0.33
NR1H3-227ENST00000498548 CD44P16070 742 aaKnown RBP17.1■□□□□ 0.33
NR1H3-227ENST00000498548 YWHAQP27348 245 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 ADORA2BP29275 332 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 HOXC13P31276 330 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 MAP3K7CLP57077 242 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 SATB1Q01826 763 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 USP4Q13107 963 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 ADSSL1Q8N142 457 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 CRYBG2Q8N1P7 616 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 ZMIZ2Q8NF64 920 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 FBXO32Q969P5 355 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 CHFRQ96EP1 664 aa17.1■□□□□ 0.33
NR1H3-227ENST00000498548 MSANTD3Q96H12 275 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms