RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 PGAP2Q9UHJ9 254 aa4.23□□□□□ -1.73
CALD1-224ENST00000498254 DYTNA2CJ06 578 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 AQP7P3A6NL99 342 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ZNF185O15231 689 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 CCNT2O60583 730 aaKnown RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 PPP6R2O75170 966 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 CD4P01730 458 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 FAM163BP0C2L3 166 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ARP10275 920 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ATP1A3P13637 1013 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ITGALP20701 1170 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 FGFR4P22455 802 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ADORA2AP29274 412 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ADD2P35612 726 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 RPS19P39019 145 aaKnown RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 TUBP50607 506 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 CTSWP56202 376 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 LOXL3P58215 753 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 RNASE9P60153 205 aaKnown RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 SCAPQ12770 1279 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 TCF15Q12870 199 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 FOXL1Q12952 345 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 GRM4Q14833 912 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 DLGAP5Q15398 846 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 FAM110CQ1W6H9 321 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 FBXO47Q5MNV8 452 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 MANEALQ5VSG8 457 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 TCERG1LQ5VWI1 586 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 RGS7BPQ6MZT1 257 aaPredicted RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 RINT1Q6NUQ1 792 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 CPOQ8IVL8 374 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 SLC44A2Q8IWA5 706 aaPredicted RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 SP8Q8IXZ3 490 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 SPARTQ8N0X7 666 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 LGI4Q8N135 537 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.22□□□□□ -1.73
CALD1-224ENST00000498254 SIMC1Q8NDZ2 872 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 MDGA1Q8NFP4 955 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 OR56A1Q8NGH5 318 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ZNF483Q8TF39 744 aaPredicted RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 ZNF384Q8TF68 577 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 EID2BQ96D98 161 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 COG8Q96MW5 612 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 TRAPPC9Q96Q05 1148 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 MED15Q96RN5 788 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 PNKPQ96T60 521 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 TEX101Q9BY14 249 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 BRD8Q9H0E9 1235 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 PABPC3Q9H361 631 aaKnown RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 ELAC1Q9H777 363 aaKnown RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 TMEM8AQ9HCN3 771 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 XPNPEP3Q9NQH7 507 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 PRDM8Q9NQV8 689 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 HECAQ9UBI9 543 aaPredicted RBP4.22□□□□□ -1.73
CALD1-224ENST00000498254 SERTAD3Q9UJW9 196 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 DTNAQ9Y4J8 743 aa4.22□□□□□ -1.73
CALD1-224ENST00000498254 ZNF536O15090 1300 aa4.21□□□□□ -1.73
CALD1-224ENST00000498254 A0A1B0GTW7 788 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 A6NLC8 198 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 PRSS47A8MTI9 375 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 CAPN14A8MX76 684 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 H0Y3Z8 333 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 ZSCAN9O15535 394 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 LAMTOR5O43504 91 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 SNX2O60749 519 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 GPANK1O95872 356 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 VIPP01282 170 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 XBP1P17861 261 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 KCNA3P22001 575 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 CST5P28325 142 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 LRPAP1P30533 357 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 DDIT3P35638 169 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 LIFRP42702 1097 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 PAPOLAP51003 745 aaKnown RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 DGKEP52429 567 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 SEC24CP53992 1094 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 SLC12A1Q13621 1099 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 RPS6KA2Q15349 733 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 P3H1Q32P28 736 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 CD300EQ496F6 205 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 FAM102AQ5T9C2 384 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 INTS11Q5TA45 600 aaKnown RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 ATPAF1Q5TC12 328 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 VPS53Q5VIR6 699 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 RETSATQ6NUM9 610 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 DRICH1Q6PGQ1 229 aaPredicted RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 SYNE3Q6ZMZ3 975 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 PCGF5Q86SE9 256 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 FUKQ8N0W3 1084 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 NME8Q8N427 588 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 CEP70Q8NHQ1 597 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 TMEM125Q96AQ2 219 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 MAELQ96JY0 434 aaKnown RBP4.21□□□□□ -1.74
CALD1-224ENST00000498254 KCNC2Q96PR1 638 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 SEC61A2Q9H9S3 476 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 ZBTB26Q9HCK0 441 aa4.21□□□□□ -1.74
CALD1-224ENST00000498254 TMOD4Q9NZQ9 345 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms