RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CACNA2D1P54289 1103 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 ELLP55199 621 aaPredicted RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 SIM1P81133 766 aaPredicted RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 RHDQ02161 417 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 BMPR2Q13873 1038 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 KIAA0753Q2KHM9 967 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 HSP90AB2PQ58FF8 381 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 ZNF618Q5T7W0 954 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 APOA5Q6Q788 366 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 SLC15A4Q8N697 577 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 FAM156AQ8NDB6 213 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 SIMC1Q8NDZ2 872 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 APIPQ96GX9 242 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 NT5C1BQ96P26 610 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 MESP1Q9BRJ9 268 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 BTBD1Q9H0C5 482 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 RIOX1Q9H6W3 641 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 RRP7BPQ9NSQ0 103 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 MRPS18AQ9NVS2 196 aaKnown RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 CFDP1Q9UEE9 299 aaPredicted RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 AFF4Q9UHB7 1163 aaKnown RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.84□□□□□ -1.47
SSR3-209ENST00000498205 SHROOM2Q13796 1616 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 PREX2Q70Z35 1606 aa5.84□□□□□ -1.47
SSR3-209ENST00000498205 UNC13BO14795 1591 aa5.84□□□□□ -1.48
SSR3-209ENST00000498205 ATP10BO94823 1461 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 CCDC141Q6ZP82 1450 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 C9orf84Q5VXU9 1444 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 DHX29Q7Z478 1369 aaKnown RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 COL11A2P13942 1736 aaPredicted RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 MBD3L4A6NDZ8 208 aaPredicted RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 MBD3L3A6NE82 208 aaPredicted RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 DCLK1O15075 740 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 SLC16A3O15427 465 aaKnown RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 URI1O94763 535 aaPredicted RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 MYBP10242 640 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 BRAFP15056 766 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 CTBP1Q13363 440 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 GRM3Q14832 879 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 LLGL1Q15334 1064 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 CNGA2Q16280 664 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 TXNRD1Q16881 649 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 INSCQ1MX18 579 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 CELF5Q8N6W0 485 aaKnown RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 IPCEF1Q8WWN9 437 aaPredicted RBP5.83□□□□□ -1.48
SSR3-209ENST00000498205 FKBP10Q96AY3 582 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 NUP62CLQ9H1M0 184 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 KIAA1586Q9HCI6 787 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 XPNPEP3Q9NQH7 507 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 OGDHLQ9ULD0 1010 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 PLB1Q6P1J6 1458 aa5.83□□□□□ -1.48
SSR3-209ENST00000498205 SMG6Q86US8 1419 aaKnown RBP5.82□□□□□ -1.48
SSR3-209ENST00000498205 PRG4Q92954 1404 aaPredicted RBP5.82□□□□□ -1.48
SSR3-209ENST00000498205 ADGRA2Q96PE1 1338 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 TBX3O15119 743 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 CCP110O43303 1012 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 TTLL1O95922 423 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 BMP5P22003 454 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 KLRC1P26715 233 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 PEX2P28328 305 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 ZNF134P52741 427 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 MAPK10P53779 464 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 LILRA4P59901 499 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 KRT17Q04695 432 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 BOP1Q14137 746 aaKnown RBP5.82□□□□□ -1.48
SSR3-209ENST00000498205 SWSAP1Q6NVH7 229 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 GPR150Q8NGU9 434 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 TFAP2BQ92481 460 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 MSLNLQ96KJ4 702 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 PPP1R9BQ96SB3 815 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 TIMP4Q99727 224 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 SMURF2Q9HAU4 748 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 ZNF287Q9HBT7 754 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 DDX20Q9UHI6 824 aaKnown RBP5.82□□□□□ -1.48
SSR3-209ENST00000498205 ENTPD2Q9Y5L3 495 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 E9PCH4 1651 aa5.82□□□□□ -1.48
SSR3-209ENST00000498205 LRPPRCP42704 1394 aaKnown RBP5.81□□□□□ -1.48
SSR3-209ENST00000498205 USP47Q96K76 1375 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 EIF2AK4Q9P2K8 1649 aaKnown RBP5.81□□□□□ -1.48
SSR3-209ENST00000498205 KIF7Q2M1P5 1343 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 TRIM43BA6NCK2 446 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 PLEKHD1A6NEE1 506 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 A6NNZ2 444 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 ADM5C9JUS6 153 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 KIAA0355O15063 1070 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 SUV39H1O43463 412 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 INMTO95050 263 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 NUDT3O95989 172 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 CHRM2P08172 466 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 ZFXP17010 805 aaPredicted RBP5.81□□□□□ -1.48
SSR3-209ENST00000498205 WT1P19544 449 aaPredicted RBP5.81□□□□□ -1.48
SSR3-209ENST00000498205 ALDH9A1P49189 494 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 PDE6CP51160 858 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 HNRNPMP52272 730 aaKnown RBP eCLIP5.81□□□□□ -1.48
SSR3-209ENST00000498205 SUMO3P55854 103 aaPredicted RBP5.81□□□□□ -1.48
SSR3-209ENST00000498205 SEMA5AQ13591 1074 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 FAM153CQ494X1 144 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 ARHGAP40Q5TG30 622 aa5.81□□□□□ -1.48
SSR3-209ENST00000498205 TSHZ1Q6ZSZ6 1077 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms