RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 RENBPP51606 427 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 RAB1AP62820 205 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 FGL2Q14314 439 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 MGAT5BQ3V5L5 792 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 L1TD1Q5T7N2 865 aaKnown RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 MIS18BP1Q6P0N0 1132 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 CNGA4Q8IV77 575 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 IZUMO1Q8IYV9 350 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 ZCRB1Q8TBF4 217 aaKnown RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 HMCESQ96FZ2 354 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 P2RX7Q99572 595 aaKnown RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 BRINP2Q9C0B6 783 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 CIPCQ9C0C6 399 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 CNNM1Q9NRU3 951 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 TRMT13Q9NUP7 481 aaKnown RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 PIH1D1Q9NWS0 290 aaKnown RBP4.35□□□□□ -1.71
CBX3-208ENST00000497498 CPA4Q9UI42 421 aa4.35□□□□□ -1.71
CBX3-208ENST00000497498 UBE2Q2LH0YL09 131 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 MYO1CO00159 1063 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 OFD1O75665 1012 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 MYCLP12524 364 aaPredicted RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 ATP5F1P24539 256 aaPredicted RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 E2F1Q01094 437 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 RABEP1Q15276 862 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 LY6KQ17RY6 165 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 CERKLQ49MI3 558 aaPredicted RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 Q4G0T1 1027 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 RNASE12Q5GAN4 147 aaKnown RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 PXDC1Q5TGL8 231 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 MEX3CQ5U5Q3 659 aaKnown RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 ZNF813Q6ZN06 617 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 CAND1Q86VP6 1230 aaKnown RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 SLC15A4Q8N697 577 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 DNAJC5GQ8N7S2 189 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 PIGOQ8TEQ8 1089 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 DIS3LQ8TF46 1054 aaKnown RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 KBTBD7Q8WVZ9 684 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 WACQ9BTA9 647 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 DPCDQ9BVM2 203 aaPredicted RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 TRIM54Q9BYV2 358 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 DPH1Q9BZG8 443 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 IP6K2Q9UHH9 426 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 SCAF8Q9UPN6 1271 aaKnown RBP4.34□□□□□ -1.71
CBX3-208ENST00000497498 SNX14Q9Y5W7 946 aa4.34□□□□□ -1.71
CBX3-208ENST00000497498 H3BML4 177 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 FCHO1O14526 889 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 FPR3P25089 353 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 KRT17Q04695 432 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 ZNF267Q14586 743 aaPredicted RBP4.33□□□□□ -1.72
CBX3-208ENST00000497498 IFIT1BQ5T764 474 aaKnown RBP4.33□□□□□ -1.72
CBX3-208ENST00000497498 LMBRD2Q68DH5 695 aaPredicted RBP4.33□□□□□ -1.72
CBX3-208ENST00000497498 ZNF517Q6ZMY9 492 aaPredicted RBP4.33□□□□□ -1.72
CBX3-208ENST00000497498 BCDIN3DQ7Z5W3 292 aaKnown RBP4.33□□□□□ -1.72
CBX3-208ENST00000497498 SFTPA1Q8IWL2 248 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 PRSS3P2Q8NHM4 247 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 ZNF398Q8TD17 642 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 ADAMTS18Q8TE60 1221 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 COQ8BQ96D53 544 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 HOOK2Q96ED9 719 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 PRR25Q96S07 402 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 FAM118BQ9BPY3 351 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 AASDHPPTQ9NRN7 309 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 ASIC5Q9NY37 505 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 TFCP2L1Q9NZI6 479 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 KLHL13Q9P2N7 655 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 AFG3L2Q9Y4W6 797 aa4.33□□□□□ -1.72
CBX3-208ENST00000497498 BTBD19C9JJ37 291 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 AP4M1O00189 453 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 VNN1O95497 513 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 FGAP02671 866 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 NPR1P16066 1061 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 HOXB6P17509 224 aaKnown RBP4.32□□□□□ -1.72
CBX3-208ENST00000497498 NCLP19338 710 aaKnown RBP4.32□□□□□ -1.72
CBX3-208ENST00000497498 IL1R2P27930 398 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 PLCD1P51178 756 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 ALDH5A1P51649 535 aaPredicted RBP4.32□□□□□ -1.72
CBX3-208ENST00000497498 CTBP1Q13363 440 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 FHL1Q13642 323 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 FAM187BQ17R55 369 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 PLA1AQ53H76 456 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 SERPINA13PQ6UXR4 307 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 ZNF783Q6ZMS7 281 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 DENND1CQ8IV53 801 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 BPIFB1Q8TDL5 484 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 FYTTD1Q96QD9 318 aaKnown RBP4.32□□□□□ -1.72
CBX3-208ENST00000497498 GABBR1Q9UBS5 961 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 STAP2Q9UGK3 403 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 AMFRQ9UKV5 643 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 FER1L4A9Z1Z3 1794 aa4.32□□□□□ -1.72
CBX3-208ENST00000497498 BTN3A1O00481 513 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 AP1G1O43747 822 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 FGBP02675 491 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 A1BGP04217 495 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 HTR1BP28222 390 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 PSG6Q00889 435 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 C4orf46Q504U0 113 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 DPY19L3Q6ZPD9 716 aa4.31□□□□□ -1.72
CBX3-208ENST00000497498 MRPL10Q7Z7H8 261 aaKnown RBP4.31□□□□□ -1.72
CBX3-208ENST00000497498 SIRT6Q8N6T7 355 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms