RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 NELL2Q99435 816 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 FAM83CQ9BQN1 747 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 CHRDQ9H2X0 955 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 EBF3Q9H4W6 596 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 APOBEC3GQ9HC16 384 aaKnown RBP20.79■□□□□ 0.92
COL20A1-208ENST00000496810 TDP1Q9NUW8 608 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 GCNT4Q9P109 453 aa20.79■□□□□ 0.92
COL20A1-208ENST00000496810 MAPK13O15264 365 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 LAMTOR5O43504 91 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 CKMP06732 381 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 CHRNB1P11230 501 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 CCDC130P13994 396 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 PRCPP42785 496 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 PMS1P54277 932 aaKnown RBP20.78■□□□□ 0.92
COL20A1-208ENST00000496810 ZXDBP98169 803 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 FAM160A1Q05DH4 1040 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 ZNF77Q15935 545 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 NAIF1Q69YI7 327 aaPredicted RBP20.78■□□□□ 0.92
COL20A1-208ENST00000496810 ACOT1Q86TX2 421 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 FAM35AQ86V20 835 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 TWNKQ96RR1 684 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 TTLL2Q9BWV7 592 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 ELOVL4Q9GZR5 314 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 LMAN1LQ9HAT1 526 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 PRMT8Q9NR22 394 aaPredicted RBP20.78■□□□□ 0.92
COL20A1-208ENST00000496810 GKN1Q9NS71 199 aa20.78■□□□□ 0.92
COL20A1-208ENST00000496810 IKBKBO14920 756 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 TRIM66O15016 1216 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 KIF20AO95235 890 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 FAM163BP0C2L3 166 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 ANXA13P27216 316 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 HOXC13P31276 330 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 CSTF1Q05048 431 aaKnown RBP20.77■□□□□ 0.92
COL20A1-208ENST00000496810 IFRD2Q12894 506 aaPredicted RBP20.77■□□□□ 0.92
COL20A1-208ENST00000496810 USP4Q13107 963 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 ADAM9Q13443 819 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 PON2Q15165 354 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 INTS8Q75QN2 995 aaKnown RBP20.77■□□□□ 0.92
COL20A1-208ENST00000496810 FUKQ8N0W3 1084 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 C8orf48Q96LL4 319 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 KCNK16Q96T55 309 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 C2orf42Q9NWW7 574 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 ZMYM5Q9UJ78 669 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 PCDHA5Q9Y5H7 936 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 MYOFQ9NZM1 2061 aa20.77■□□□□ 0.92
COL20A1-208ENST00000496810 DNAH14Q0VDD8 3507 aa20.77■□□□□ 0.91
COL20A1-208ENST00000496810 TRAV19A0A0A6YYK7 116 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 TRIM49BA6NDI0 452 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 GOLGA6L4A6NEF3 574 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 GADD45BO75293 160 aaPredicted RBP20.76■□□□□ 0.91
COL20A1-208ENST00000496810 PSMC2P35998 433 aaKnown RBP20.76■□□□□ 0.91
COL20A1-208ENST00000496810 MAGEA9P43362 315 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 NDST1P52848 882 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 NOP14P78316 857 aaKnown RBP20.76■□□□□ 0.91
COL20A1-208ENST00000496810 PLCB2Q00722 1185 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 ZNF268Q14587 947 aaPredicted RBP20.76■□□□□ 0.91
COL20A1-208ENST00000496810 MTF1Q14872 753 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 SGSM1Q2NKQ1 1148 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 SPATA20Q8TB22 786 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 C8orf33Q9H7E9 229 aaPredicted RBP20.76■□□□□ 0.91
COL20A1-208ENST00000496810 KIF9Q9HAQ2 790 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 KRT82Q9NSB4 513 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 WNT6Q9Y6F9 365 aa20.76■□□□□ 0.91
COL20A1-208ENST00000496810 SCAMP3O14828 347 aaKnown RBP20.75■□□□□ 0.91
COL20A1-208ENST00000496810 NCAM2O15394 837 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 TDGF1P13385 188 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 MLLT6P55198 1093 aaPredicted RBP20.75■□□□□ 0.91
COL20A1-208ENST00000496810 TAF10Q12962 218 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 EDRF1Q3B7T1 1238 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 ITPRIPL2Q3MIP1 535 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 ZNF658Q5TYW1 1059 aaPredicted RBP20.75■□□□□ 0.91
COL20A1-208ENST00000496810 RALGPS2Q86X27 583 aaPredicted RBP20.75■□□□□ 0.91
COL20A1-208ENST00000496810 C12orf29Q8N999 325 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 ZMIZ2Q8NF64 920 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 SEMA4DQ92854 862 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 FAM49BQ9NUQ9 324 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 FBXO4Q9UKT5 387 aa20.75■□□□□ 0.91
COL20A1-208ENST00000496810 ZNF840PA6NDX5 716 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 SOBPA7XYQ1 873 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 BEST1O76090 585 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 USP17L7P0C7H9 530 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 KRT13P13646 458 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 RPL13P26373 211 aaKnown RBP20.74■□□□□ 0.91
COL20A1-208ENST00000496810 SATB1Q01826 763 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 CCINQ13939 588 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 ISM2Q6H9L7 571 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 SCAMP5Q8TAC9 235 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 SLC2A14Q8TDB8 520 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 SH3RF2Q8TEC5 729 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 TAF4BQ92750 862 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 MSANTD3Q96H12 275 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 MED10Q9BTT4 135 aa20.74■□□□□ 0.91
COL20A1-208ENST00000496810 THG1LQ9NWX6 298 aaKnown RBP20.74■□□□□ 0.91
COL20A1-208ENST00000496810 CD44P16070 742 aaKnown RBP20.73■□□□□ 0.91
COL20A1-208ENST00000496810 HDCP19113 662 aa20.73■□□□□ 0.91
COL20A1-208ENST00000496810 RUNX3Q13761 415 aa20.73■□□□□ 0.91
COL20A1-208ENST00000496810 PKN3Q6P5Z2 889 aa20.73■□□□□ 0.91
COL20A1-208ENST00000496810 ZC3H3Q8IXZ2 948 aaKnown RBP20.73■□□□□ 0.91
COL20A1-208ENST00000496810 SMARCE1Q969G3 411 aa20.73■□□□□ 0.91
COL20A1-208ENST00000496810 SMARCD1Q96GM5 515 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms