RNA–Protein interactions for RNA: ENST00000496204.1

RAD50-208, Transcript of RAD50 double strand break repair protein, human

TSL 3

Gene RAD50, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD50-208	ENST00000496204		A0A087WWL8	130 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	EXOC3	O60645	756 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	PARN	O95453	639 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	CHRM5	P08912	532 aa	Predicted RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	LRPAP1	P30533	357 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	MMP13	P45452	471 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	KCNJ5	P48544	419 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	PDE6C	P51160	858 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	RENBP	P51606	427 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	TPTE	P56180	551 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	WNT3	P56703	355 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	LINC00205	P59089	165 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	GPSM2	P81274	684 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	PSG6	Q00889	435 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	E2F1	Q01094	437 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	FHL1	Q13642	323 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF267	Q14586	743 aa	Predicted RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	TRIP6	Q15654	476 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	TBC1D25	Q3MII6	688 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	L1TD1	Q5T7N2	865 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	MEX3C	Q5U5Q3	659 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	MTHFD1L	Q6UB35	978 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	CRELD2	Q6UXH1	353 aa	Predicted RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	DPY19L3	Q6ZPD9	716 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	BCDIN3D	Q7Z5W3	292 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	GAS2L3	Q86XJ1	694 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	CNGA4	Q8IV77	575 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	SLC15A3	Q8IY34	581 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	IZUMO1	Q8IYV9	350 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	OSCP1	Q8WVF1	389 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	COQ8B	Q96D53	544 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	MOGAT1	Q96PD6	335 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	PRR25	Q96S07	402 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	CIPC	Q9C0C6	399 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	SARS2	Q9NP81	518 aa	Known RBP	3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	HOMER2	Q9NSB8	354 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	KLHL13	Q9P2N7	655 aa		3.13	□□□□□ -1.91
RAD50-208	ENST00000496204	AP4M1	O00189	453 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	ABLIM3	O94929	683 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	TH	P07101	528 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	CYP2C9	P11712	490 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	NPR1	P16066	1061 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	CCT4	P50991	539 aa	Known RBP	3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	ALDH5A1	P51649	535 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	RAB1A	P62820	205 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	GTF2H3	Q13889	308 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF260	Q3ZCT1	412 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	CCDC157	Q569K6	752 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	MIS18BP1	Q6P0N0	1132 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	ZNF813	Q6ZN06	617 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	IRF2BP2	Q7Z5L9	587 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	CAND1	Q86VP6	1230 aa	Known RBP	3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	GRAMD1C	Q8IYS0	662 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	DNAJC5G	Q8N7S2	189 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	NRAC	Q8N912	160 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	DIS3L	Q8TF46	1054 aa	Known RBP	3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	IGFBPL1	Q8WX77	278 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	C1GALT1C1	Q96EU7	318 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	HMCES	Q96FZ2	354 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	NT5C1B	Q96P26	610 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	MAP3K14	Q99558	947 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	TRIM54	Q9BYV2	358 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	DPH1	Q9BZG8	443 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	MTMR4	Q9NYA4	1195 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	STAP2	Q9UGK3	403 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	CPA4	Q9UI42	421 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	TMX2	Q9Y320	296 aa		3.12	□□□□□ -1.91
RAD50-208	ENST00000496204	KAT6A	Q92794	2004 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	LY6G6E	A0A0G2JKS1	128 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	FGA	P02671	866 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	S100B	P04271	92 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PRKCB	P05771	671 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	DLD	P09622	509 aa	Known RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PF4V1	P10720	104 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	MYCL	P12524	364 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	HOXB6	P17509	224 aa	Known RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	IL1R2	P27930	398 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	HOXD9	P28356	352 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	NEK2	P51955	445 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	CTBP1	Q13363	440 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	FAM187B	Q17R55	369 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PTCHD3	Q3KNS1	767 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	B3GNT9	Q6UX72	402 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PIP4P1	Q86T03	277 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	ZBTB46	Q86UZ6	589 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	COL23A1	Q86Y22	540 aa	Predicted RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	SLC15A4	Q8N697	577 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	C16orf52	Q8NHV5	167 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PIGO	Q8TEQ8	1089 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	PNISR	Q8TF01	805 aa	Known RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	CTHRC1	Q96CG8	243 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	RSPRY1	Q96DX4	576 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	HOOK2	Q96ED9	719 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	VCPIP1	Q96JH7	1222 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	C17orf80	Q9BSJ5	609 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	SMURF2	Q9HAU4	748 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	TRNAU1AP	Q9NX07	287 aa	Known RBP	3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	CHPF2	Q9P2E5	772 aa		3.11	□□□□□ -1.91
RAD50-208	ENST00000496204	GABBR1	Q9UBS5	961 aa		3.11	□□□□□ -1.91

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