RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 DDX23Q9BUQ8 820 aaKnown RBP18.74■□□□□ 0.59
HDAC4-211ENST00000494800 OSBPL6Q9BZF3 934 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 FAM124BQ9H5Z6 455 aaPredicted RBP18.74■□□□□ 0.59
HDAC4-211ENST00000494800 APOBEC3GQ9HC16 384 aaKnown RBP18.74■□□□□ 0.59
HDAC4-211ENST00000494800 TDP1Q9NUW8 608 aa18.74■□□□□ 0.59
HDAC4-211ENST00000494800 AP1G2O75843 785 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 PRAMEF12O95522 483 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 PFKLP17858 780 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 CD58P19256 250 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 BMP6P22004 513 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 ZNF268Q14587 947 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-211ENST00000494800 TTI2Q6NXR4 508 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 CC2D1AQ6P1N0 951 aaPredicted RBP18.73■□□□□ 0.59
HDAC4-211ENST00000494800 NUP93Q8N1F7 819 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 DTWD2Q8NBA8 298 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 PDZD8Q8NEN9 1154 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 RSPRY1Q96DX4 576 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 GBP4Q96PP9 640 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 TTLL2Q9BWV7 592 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 FOXQ1Q9C009 403 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 KRT82Q9NSB4 513 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 KMT2EQ8IZD2 1858 aa18.73■□□□□ 0.59
HDAC4-211ENST00000494800 TADA3O75528 432 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 YWHAQP27348 245 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 MAGEA9P43362 315 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 KPNA1P52294 538 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 MLLT6P55198 1093 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 YWHAEP62258 255 aaKnown RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 ORC1Q13415 861 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 CBWD6Q4V339 395 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 CBWD3Q5JTY5 395 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 CBWD5Q5RIA9 395 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 FUKQ8N0W3 1084 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 SLC2A14Q8TDB8 520 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 SLC35C1Q96A29 364 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 DUSP9Q99956 384 aaKnown RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 SMG9Q9H0W8 520 aaKnown RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 C8orf33Q9H7E9 229 aaPredicted RBP18.72■□□□□ 0.59
HDAC4-211ENST00000494800 LTB4R2Q9NPC1 389 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 HMGXB4Q9UGU5 601 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 COQ4Q9Y3A0 265 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 PIAS3Q9Y6X2 628 aa18.72■□□□□ 0.59
HDAC4-211ENST00000494800 FAM170BA6NMN3 283 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 CILPO75339 1184 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 DCNP07585 359 aaKnown RBP18.71■□□□□ 0.59
HDAC4-211ENST00000494800 FAM200BP0CF97 657 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 CCDC130P13994 396 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 NHLH1Q02575 133 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 TCF15Q12870 199 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 IFRD2Q12894 506 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-211ENST00000494800 CLEC17AQ6ZS10 378 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 OVCA2Q8WZ82 227 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 SEMA4DQ92854 862 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 ATOH1Q92858 354 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-211ENST00000494800 USP13Q92995 863 aaPredicted RBP18.71■□□□□ 0.59
HDAC4-211ENST00000494800 FAM49BQ9NUQ9 324 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 COMMD8Q9NX08 183 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 ZNF318Q5VUA4 2279 aa18.71■□□□□ 0.59
HDAC4-211ENST00000494800 GOLGA6L22H0YM25 854 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 ABL1P00519 1130 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 CCDC192P0DO97 292 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 HDCP19113 662 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 ADORA2BP29275 332 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 FMO5P49326 533 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 CACNA2D1P54289 1103 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 STX17P56962 302 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 USP46P62068 366 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 TAF10Q12962 218 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 C12orf29Q8N999 325 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 MLKLQ8NB16 471 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 FAM3CQ92520 227 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 FBXO32Q969P5 355 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 CYFIP2Q96F07 1278 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 KCNK16Q96T55 309 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 HNRNPABQ99729 332 aaKnown RBP18.7■□□□□ 0.58
HDAC4-211ENST00000494800 CLSTN2Q9H4D0 955 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 FBXO44Q9H4M3 255 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 CISHQ9NSE2 258 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 RWDD2AQ9UIY3 292 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 ZDBF2Q9HCK1 2354 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 NCANO14594 1321 aa18.7■□□□□ 0.58
HDAC4-211ENST00000494800 NUP210Q8TEM1 1887 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-211ENST00000494800 ZNF840PA6NDX5 716 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 H0Y858 1186 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 ARNTLO00327 626 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 P4HA2O15460 535 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 CD72P21854 359 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 TBXAS1P24557 533 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-211ENST00000494800 SLC5A3P53794 718 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 MAP3K7CLP57077 242 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 AMPD2Q01433 879 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 PAQR9Q6ZVX9 377 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 ARL14EPQ8N8R7 260 aaPredicted RBP18.69■□□□□ 0.58
HDAC4-211ENST00000494800 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 ZFYVE19Q96K21 471 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 HEXIM2Q96MH2 286 aaKnown RBP18.69■□□□□ 0.58
HDAC4-211ENST00000494800 LRRC3BQ96PB8 259 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 SRRTQ9BXP5 876 aaKnown RBP18.69■□□□□ 0.58
HDAC4-211ENST00000494800 NUP62CLQ9H1M0 184 aa18.69■□□□□ 0.58
HDAC4-211ENST00000494800 CSNK1G1Q9HCP0 422 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms