RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 CKMP06732 381 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 PMS1P54277 932 aaKnown RBP35.31■■■■□ 3.24
CBX4-203ENST00000494546 MLLT6P55198 1093 aaPredicted RBP35.31■■■■□ 3.24
CBX4-203ENST00000494546 ANKRD40Q6AI12 368 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 FAM35AQ86V20 835 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 ELOA2Q8IYF1 753 aaPredicted RBP35.31■■■■□ 3.24
CBX4-203ENST00000494546 CCDC150Q8NCX0 1101 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 TTC16Q8NEE8 873 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 TTLL2Q9BWV7 592 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 APOBEC3GQ9HC16 384 aaKnown RBP35.31■■■■□ 3.24
CBX4-203ENST00000494546 GKN1Q9NS71 199 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 TRPM5Q9NZQ8 1165 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 MAN1B1Q9UKM7 699 aa35.31■■■■□ 3.24
CBX4-203ENST00000494546 USP17L7P0C7H9 530 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 GTF2H1P32780 548 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 IFRD2Q12894 506 aaPredicted RBP35.3■■■■□ 3.24
CBX4-203ENST00000494546 FZD5Q13467 585 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 ZNF268Q14587 947 aaPredicted RBP35.3■■■■□ 3.24
CBX4-203ENST00000494546 KRT39Q6A163 491 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 ZNF687Q8N1G0 1237 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 ARL14EPQ8N8R7 260 aaPredicted RBP35.3■■■■□ 3.24
CBX4-203ENST00000494546 MSANTD3Q96H12 275 aa35.3■■■■□ 3.24
CBX4-203ENST00000494546 TRIM49BA6NDI0 452 aa35.29■■■■□ 3.24
CBX4-203ENST00000494546 RPS9P46781 194 aaKnown RBP35.29■■■■□ 3.24
CBX4-203ENST00000494546 FKBP3Q00688 224 aaKnown RBP35.29■■■■□ 3.24
CBX4-203ENST00000494546 STIM1Q13586 685 aa35.29■■■■□ 3.24
CBX4-203ENST00000494546 CC2D1AQ6P1N0 951 aaPredicted RBP35.29■■■■□ 3.24
CBX4-203ENST00000494546 UNC93AQ86WB7 457 aa35.29■■■■□ 3.24
CBX4-203ENST00000494546 SPECC1L-ADORA2AF8WAN1 911 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 LAMTOR5O43504 91 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 CCDC130P13994 396 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 MXI1P50539 228 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 PAQR9Q6ZVX9 377 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 RIN3Q8TB24 985 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 SMARCD1Q96GM5 515 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 KCNK16Q96T55 309 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 NIF3L1Q9GZT8 377 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 LMAN1LQ9HAT1 526 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 GCNT4Q9P109 453 aa35.28■■■■□ 3.24
CBX4-203ENST00000494546 PROB1E7EW31 1015 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 PSMA7O14818 248 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 STX10O60499 249 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 HDCP19113 662 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 CTHP32929 405 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 MCCD1P59942 119 aaPredicted RBP35.27■■■■□ 3.24
CBX4-203ENST00000494546 LRRC63Q05C16 580 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 ITPRIPL2Q3MIP1 535 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 DCAF17Q5H9S7 520 aaPredicted RBP35.27■■■■□ 3.24
CBX4-203ENST00000494546 TCERG1LQ5VWI1 586 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 TRIM68Q6AZZ1 485 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 C1orf228Q6PIY5 440 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 RALGPS2Q86X27 583 aaPredicted RBP35.27■■■■□ 3.24
CBX4-203ENST00000494546 FUKQ8N0W3 1084 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 CRYBG2Q8N1P7 616 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 FAM83CQ9BQN1 747 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 CYP3A43Q9HB55 503 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 KRT82Q9NSB4 513 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 GREB1Q4ZG55 1949 aa35.27■■■■□ 3.24
CBX4-203ENST00000494546 ZNF638Q14966 1978 aaKnown RBP35.26■■■■□ 3.24
CBX4-203ENST00000494546 SLC16A3O15427 465 aaKnown RBP35.26■■■■□ 3.24
CBX4-203ENST00000494546 GFRA3O60609 400 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 ABL1P00519 1130 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 SP9P0CG40 484 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 TAF10Q12962 218 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 ZC3H3Q8IXZ2 948 aaKnown RBP35.26■■■■□ 3.24
CBX4-203ENST00000494546 MAML2Q8IZL2 1156 aaPredicted RBP35.26■■■■□ 3.24
CBX4-203ENST00000494546 NUP93Q8N1F7 819 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 SEMA4DQ92854 862 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 SLITRK1Q96PX8 696 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 EBF3Q9H4W6 596 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 DMAP1Q9NPF5 467 aaPredicted RBP35.26■■■■□ 3.24
CBX4-203ENST00000494546 FAM49BQ9NUQ9 324 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 CHMP5Q9NZZ3 219 aa35.26■■■■□ 3.24
CBX4-203ENST00000494546 PIEZO1Q92508 2521 aa35.26■■■■□ 3.23
CBX4-203ENST00000494546 AP1G2O75843 785 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 CD58P19256 250 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 PPP3CCP48454 512 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 PDE6CP51160 858 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 TXNDC11Q6PKC3 985 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 C12orf29Q8N999 325 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 FBXL13Q8NEE6 735 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 SLC2A14Q8TDB8 520 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 TWNKQ96RR1 684 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 F5P12259 2224 aa35.25■■■■□ 3.23
CBX4-203ENST00000494546 ZNF840PA6NDX5 716 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 CD44P16070 742 aaKnown RBP35.24■■■■□ 3.23
CBX4-203ENST00000494546 TRIM21P19474 475 aaKnown RBP35.24■■■■□ 3.23
CBX4-203ENST00000494546 YWHAQP27348 245 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 INCA1Q0VD86 236 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 RUNX3Q13761 415 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 MTF1Q14872 753 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 DHTKD1Q96HY7 919 aaPredicted RBP35.24■■■■□ 3.23
CBX4-203ENST00000494546 HPS4Q9NQG7 708 aa35.24■■■■□ 3.23
CBX4-203ENST00000494546 RTN3O95197 1032 aaPredicted RBP35.23■■■■□ 3.23
CBX4-203ENST00000494546 MTAPQ13126 283 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 ZNF77Q15935 545 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 KLHL10Q6JEL2 608 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 SH3RF2Q8TEC5 729 aa35.23■■■■□ 3.23
CBX4-203ENST00000494546 NKD2Q969F2 451 aaPredicted RBP35.23■■■■□ 3.23
CBX4-203ENST00000494546 NT5C1AQ9BXI3 368 aa35.23■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms