RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-231ENST00000492170 OR6B3Q8NGW1 331 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 SCFD1Q8WVM8 642 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 CD101Q93033 1021 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 ACDQ96AP0 544 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 CCDC127Q96BQ5 260 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 PCED1BQ96HM7 432 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
MRPL55-231ENST00000492170 FBRSL1Q9HCM7 1045 aaKnown RBP16.37■□□□□ 0.21
MRPL55-231ENST00000492170 TRPM5Q9NZQ8 1165 aa16.37■□□□□ 0.21
MRPL55-231ENST00000492170 SLC30A4O14863 429 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 POLR2DO15514 142 aaKnown RBP16.36■□□□□ 0.21
MRPL55-231ENST00000492170 TACC1O75410 805 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 AKAP3O75969 853 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 NFATC1O95644 943 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 FAM163BP0C2L3 166 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 PPP3CCP48454 512 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 TRPC3Q13507 836 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 PKP1Q13835 747 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 BECN1Q14457 450 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-231ENST00000492170 NAIF1Q69YI7 327 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-231ENST00000492170 RPLP0P6Q8NHW5 317 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 CCDC26Q8TAB7 109 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-231ENST00000492170 LOXL4Q96JB6 756 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 TTLL2Q9BWV7 592 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 FAM13BQ9NYF5 915 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
MRPL55-231ENST00000492170 SPTBN2O15020 2390 aa16.36■□□□□ 0.21
MRPL55-231ENST00000492170 F8VP50 259 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 F13A1P00488 732 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-231ENST00000492170 ME1P48163 572 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 USP46P62068 366 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 NOP14P78316 857 aaKnown RBP16.35■□□□□ 0.21
MRPL55-231ENST00000492170 EHHADHQ08426 723 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 PSMD2Q13200 908 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 BMT2Q1RMZ1 405 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 FOXD4L6Q3SYB3 417 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-231ENST00000492170 FOXD4L3Q6VB84 417 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-231ENST00000492170 SYAP1Q96A49 352 aaPredicted RBP16.35■□□□□ 0.21
MRPL55-231ENST00000492170 C8orf48Q96LL4 319 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 HHIPQ96QV1 700 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 ELOVL4Q9GZR5 314 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 BLZF1Q9H2G9 400 aa16.35■□□□□ 0.21
MRPL55-231ENST00000492170 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 LEFTY2O00292 366 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 AXIN1O15169 862 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 EPN2O95208 641 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 APBB3O95704 486 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 STAU1O95793 577 aaKnown RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 PTPN1P18031 435 aaKnown RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 CASP1P29466 404 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 ATICP31939 592 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 AASDHQ4L235 1098 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 TDRD10Q5VZ19 366 aaKnown RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 SYT13Q7L8C5 426 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 KBTBD6Q86V97 674 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 C12orf56Q8IXR9 622 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 C12orf50Q8NA57 414 aaPredicted RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 SLITRK1Q96PX8 696 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 ARRDC1-AS1Q9H2J1 176 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 SLC39A2Q9NP94 309 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 NXF1Q9UBU9 619 aaKnown RBP16.34■□□□□ 0.21
MRPL55-231ENST00000492170 GREB1Q4ZG55 1949 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 ANAPC1Q9H1A4 1944 aa16.34■□□□□ 0.21
MRPL55-231ENST00000492170 PTPRDP23468 1912 aa16.33■□□□□ 0.21
MRPL55-231ENST00000492170 RALGAPA1Q6GYQ0 2036 aa16.33■□□□□ 0.21
MRPL55-231ENST00000492170 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF840PA6NDX5 716 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 A8MXQ7 604 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 EXOC3O60645 756 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 PHACTR2O75167 634 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 CLSTN1O94985 981 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 ABL1P00519 1130 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 AFMP43652 599 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 MYL6P60660 151 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 SLC7A9P82251 487 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 DMC1Q14565 340 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 KNOP1Q1ED39 458 aaKnown RBP16.33■□□□□ 0.2
MRPL55-231ENST00000492170 CEP57L1Q8IYX8 460 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 KIAA1958Q8N8K9 716 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 B3GALNT2Q8NCR0 500 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 GOLGA5Q8TBA6 731 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 ZNF518BQ9C0D4 1074 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 LINC00597Q9H2U6 94 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 DPEP3Q9H4B8 488 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 POLR3BQ9NW08 1133 aaPredicted RBP16.33■□□□□ 0.2
MRPL55-231ENST00000492170 PCDHA7Q9UN72 937 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 NME7Q9Y5B8 376 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 PCDHGA5Q9Y5G8 931 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 HELZP42694 1942 aaKnown RBP16.33■□□□□ 0.2
MRPL55-231ENST00000492170 ATG2BQ96BY7 2078 aa16.33■□□□□ 0.2
MRPL55-231ENST00000492170 SLC9A3R1O14745 358 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-231ENST00000492170 GDF9O60383 454 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
MRPL55-231ENST00000492170 IFRD2Q12894 506 aaPredicted RBP16.32■□□□□ 0.2
MRPL55-231ENST00000492170 TAF10Q12962 218 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms