RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SLC39A12Q504Y0 691 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 C2orf27AQ580R0 203 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 HYIQ5T013 277 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 TRIM68Q6AZZ1 485 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 JADE1Q6IE81 842 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 PRICKLE2Q7Z3G6 844 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 TMEM150AQ86TG1 271 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 TMPRSS12Q86WS5 348 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 CMTM8Q8IZV2 173 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 SYT2Q8N9I0 419 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 GIPC2Q8TF65 315 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 RLN3Q8WXF3 142 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 KCNN1Q92952 543 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 TSPAN18Q96SJ8 248 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 SEPT5Q99719 369 aaPredicted RBP12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 LLPHQ9BRT6 129 aaKnown RBP12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 ZCWPW1Q9H0M4 648 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 EBF3Q9H4W6 596 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 MMP17Q9ULZ9 603 aa12.63□□□□□ -0.39
CACNA1C-228ENST00000492150 DENND4CQ5VZ89 1909 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 MYH11P35749 1972 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 ANO9A1A5B4 782 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 PLK4O00444 970 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 PIRO00625 290 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 OGTO15294 1046 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 F11P03951 625 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 ARSAP15289 507 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 SLC12A3P55017 1021 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 KYAT1Q16773 422 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 MGAT5BQ3V5L5 792 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 C4orf17Q53FE4 359 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 ARSHQ5FYA8 562 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 C6orf118Q5T5N4 469 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 C9orf57Q5W0N0 161 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 NAIF1Q69YI7 327 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 DTHD1Q6ZMT9 781 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 DBX2Q6ZNG2 339 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 LRRTM3Q86VH5 581 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 RIN3Q8TB24 985 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 USP33Q8TEY7 942 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 USP13Q92995 863 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 CD101Q93033 1021 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 BICD1Q96G01 975 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 RPF1Q9H9Y2 349 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 LIMCH1Q9UPQ0 1083 aa12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 USP9YO00507 2555 aaPredicted RBP12.62□□□□□ -0.39
CACNA1C-228ENST00000492150 ZNF638Q14966 1978 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 ANK1P16157 1881 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 LAD1O00515 517 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 PIGRP01833 764 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 NFICP08651 508 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 PLA2G4BP0C869 781 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 HAPLN1P10915 354 aaPredicted RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 PAX3P23760 479 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 NMT1P30419 496 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 GJA4P35212 333 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 LIG4P49917 911 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 UCNP55089 124 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 NLRP12P59046 1061 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 ZNF33AQ06730 810 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 RTP5Q14D33 572 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SLC39A4Q6P5W5 647 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SLC36A4Q6YBV0 504 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SPACA3Q8IXA5 215 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 FRMD1Q8N878 549 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 MAB21L3Q8N8X9 362 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SETD7Q8WTS6 366 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SNRNP27Q8WVK2 155 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 FGF11Q92914 225 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 FAM212AQ96EL1 285 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 PLIN2Q99541 437 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 NRSN2Q9GZP1 204 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SUSD2Q9UGT4 822 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 ZMYM5Q9UJ78 669 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 CPSF3Q9UKF6 684 aaKnown RBP12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 SCN1AP35498 2009 aa12.61□□□□□ -0.39
CACNA1C-228ENST00000492150 A0A0B4J269 797 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 H0YCG3 227 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 HNRNPDLO14979 420 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 FLRT2O43155 660 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 AVPR1AP37288 418 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 HMGN5P82970 282 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 SEMG2Q02383 582 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 PSMD2Q13200 908 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 UBAP2LQ14157 1087 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 TAF12Q16514 161 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 PTPRNQ16849 979 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 TXNDC8Q6A555 127 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 CD302Q8IX05 232 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 SPPL2BQ8TCT7 592 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 C2orf15Q8WU43 125 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 MSTO1Q9BUK6 570 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 FAM124BQ9H5Z6 455 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 TDP1Q9NUW8 608 aa12.6□□□□□ -0.39
CACNA1C-228ENST00000492150 KCND2Q9NZV8 630 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms