RNA–Protein interactions for RNA: ENST00000491382.1

PFDN6-207, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-207ENST00000491382 KIF9Q9HAQ2 790 aa17.01■□□□□ 0.31
PFDN6-207ENST00000491382 FAM49BQ9NUQ9 324 aa17.01■□□□□ 0.31
PFDN6-207ENST00000491382 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.01■□□□□ 0.31
PFDN6-207ENST00000491382 TICRRQ7Z2Z1 1910 aa17.01■□□□□ 0.31
PFDN6-207ENST00000491382 ANAPC1Q9H1A4 1944 aa17.01■□□□□ 0.31
PFDN6-207ENST00000491382 TRAV19A0A0A6YYK7 116 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TADA3O75528 432 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 AP1G2O75843 785 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 NPR3P17342 541 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 AOC1P19801 751 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TBXAS1P24557 533 aaPredicted RBP17■□□□□ 0.31
PFDN6-207ENST00000491382 NUBP1P53384 320 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 CACNA2D1P54289 1103 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 VCPP55072 806 aaKnown RBP17■□□□□ 0.31
PFDN6-207ENST00000491382 FCHO2Q0JRZ9 810 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TPD52L1Q16890 204 aaPredicted RBP17■□□□□ 0.31
PFDN6-207ENST00000491382 SLC44A4Q53GD3 710 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 CWF19L1Q69YN2 538 aaKnown RBP17■□□□□ 0.31
PFDN6-207ENST00000491382 TXNDC8Q6A555 127 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TRIM59Q8IWR1 403 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 C12orf29Q8N999 325 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 BPIFB1Q8TDL5 484 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TWNKQ96RR1 684 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TRPC7Q9HCX4 862 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 TRPV5Q9NQA5 729 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 CISHQ9NSE2 258 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 THG1LQ9NWX6 298 aaKnown RBP17■□□□□ 0.31
PFDN6-207ENST00000491382 TRPM5Q9NZQ8 1165 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 PATJQ8NI35 1801 aa17■□□□□ 0.31
PFDN6-207ENST00000491382 ZNF318Q5VUA4 2279 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 CHADO15335 359 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 PRAMEF12O95522 483 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 AFPP02771 609 aaKnown RBP16.99■□□□□ 0.31
PFDN6-207ENST00000491382 CKMP06732 381 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 USP17L7P0C7H9 530 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 FAM200BP0CF97 657 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 PFKLP17858 780 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 ADORA2BP29275 332 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 STARD6P59095 220 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 USP46P62068 366 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 PLCB2Q00722 1185 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 KCNH2Q12809 1159 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 IFRD2Q12894 506 aaPredicted RBP16.99■□□□□ 0.31
PFDN6-207ENST00000491382 CUL2Q13617 745 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 ARHGAP29Q52LW3 1261 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 PAQR9Q6ZVX9 377 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 GPIHBP1Q8IV16 184 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 PDZD8Q8NEN9 1154 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 CSGALNACT1Q8TDX6 532 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 TATDN2Q93075 761 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 RSPRY1Q96DX4 576 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 NT5C1BQ96P26 610 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 KCNK16Q96T55 309 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
PFDN6-207ENST00000491382 ARID3AQ99856 593 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 TDP1Q9NUW8 608 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 TMEM30AQ9NV96 361 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 RAPGEFL1Q9UHV5 662 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 HELZP42694 1942 aaKnown RBP16.99■□□□□ 0.31
PFDN6-207ENST00000491382 COL4A2P08572 1712 aa16.99■□□□□ 0.31
PFDN6-207ENST00000491382 NCANO14594 1321 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 MIA3Q5JRA6 1907 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 MBD3O95983 291 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 YWHAQP27348 245 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 ZNF268Q14587 947 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-207ENST00000491382 DPCR1Q3MIW9 517 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 ZNF394Q53GI3 561 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 TMEM105Q8N8V8 129 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 OVCA2Q8WZ82 227 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 USP13Q92995 863 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-207ENST00000491382 TMEM176AQ96HP8 235 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 CNOT6LQ96LI5 555 aaKnown RBP16.98■□□□□ 0.31
PFDN6-207ENST00000491382 SMG9Q9H0W8 520 aaKnown RBP16.98■□□□□ 0.31
PFDN6-207ENST00000491382 CSNK1G1Q9HCP0 422 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 HEBP1Q9NRV9 189 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 COMMD8Q9NX08 183 aa16.98■□□□□ 0.31
PFDN6-207ENST00000491382 KIF26AQ9ULI4 1882 aaPredicted RBP16.98■□□□□ 0.31
PFDN6-207ENST00000491382 MYO16Q9Y6X6 1858 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 KANSL1LA0AUZ9 987 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 ERCC5P28715 1186 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-207ENST00000491382 SLC5A3P53794 718 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 LRMPQ12912 555 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 TAF10Q12962 218 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 CT47A1Q5JQC4 288 aaPredicted RBP16.97■□□□□ 0.31
PFDN6-207ENST00000491382 TPRG1Q6ZUI0 275 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 CREBRFQ8IUR6 639 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 FAM114A1Q8IWE2 563 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 GPT2Q8TD30 523 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 FBXO32Q969P5 355 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 HEXIM2Q96MH2 286 aaKnown RBP16.97■□□□□ 0.31
PFDN6-207ENST00000491382 SMOQ99835 787 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 DDX23Q9BUQ8 820 aaKnown RBP16.97■□□□□ 0.31
PFDN6-207ENST00000491382 FBXO44Q9H4M3 255 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 MRPS17Q9Y2R5 130 aaKnown RBP16.97■□□□□ 0.31
PFDN6-207ENST00000491382 SIT1Q9Y3P8 196 aa16.97■□□□□ 0.31
PFDN6-207ENST00000491382 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms