RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ALDH1A3P47895 512 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 USP46P62068 366 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 NTHL1P78549 312 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 CDR2Q01850 454 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 KLHL30Q0D2K2 578 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 BST2Q10589 180 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 PLD1Q13393 1074 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 STILQ15468 1287 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 CTC1Q2NKJ3 1217 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 PKDCCQ504Y2 493 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 HGSNATQ68CP4 663 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 WDR59Q6PJI9 974 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 VSTM1Q6UX27 236 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 TMEM184AQ6ZMB5 413 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 ZNF571Q7Z3V5 609 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 PIGZQ86VD9 579 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 WDTC1Q8N5D0 677 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 OR8K1Q8NGG5 319 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 ZNF707Q96C28 371 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 PABPC5Q96DU9 382 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 C8orf48Q96LL4 319 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 DNAJC7Q99615 494 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 NUCKS1Q9H1E3 243 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 SFXN1Q9H9B4 322 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 ZNF334Q9HCZ1 680 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 DZANK1Q9NVP4 752 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 TJP2Q9UDY2 1190 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 PCDHGC3Q9UN70 934 aa11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 MAGED2Q9UNF1 606 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-227ENST00000491104 CCDC195A0A1B0GUA6 201 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 H3BQ06 376 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 XPO1O14980 1071 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 C1RP00736 705 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SETSIPP0DME0 302 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SRGAP2BP0DMP2 458 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 GPD2P43304 727 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SLC5A3P53794 718 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 RPL10AP62906 217 aaKnown RBP11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 COL19A1Q14993 1142 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 PMF1Q6P1K2 205 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 DNAAF5Q86Y56 855 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 CNGA4Q8IV77 575 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 MAFAQ8NHW3 353 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SCAMP5Q8TAC9 235 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 HDAC7Q8WUI4 952 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SYN2Q92777 582 aaPredicted RBP11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 SYT11Q9BT88 431 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 CSNK1G1Q9HCP0 422 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 PRDM6Q9NQX0 595 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 ZDHHC7Q9NXF8 308 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 ARHGAP20Q9P2F6 1191 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 HSFX1Q9UBD0 423 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 MAFFQ9ULX9 164 aa11.37□□□□□ -0.59
CACNA1C-227ENST00000491104 NRG2O14511 850 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 TNFRSF10BO14763 440 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 GABBR2O75899 941 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CYP1A1P04798 512 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 SERPING1P05155 500 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CCDC172P0C7W6 258 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 LCP1P13796 627 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 HMGA1P17096 107 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 TNFAIP3P21580 790 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 KCNA5P22460 613 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 HNRNPH3P31942 346 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 EIF4A3P38919 411 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 PLA2G4AP47712 749 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 EPHB3P54753 998 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 NOMO3P69849 1222 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 ADIGQ0VDE8 80 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 VEPH1Q14D04 833 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 C2CD6Q53TS8 623 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 NAA35Q5VZE5 725 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 SMYD5Q6GMV2 418 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 ELMSAN1Q6PJG2 1045 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 DENND5BQ6ZUT9 1274 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CCDC186Q7Z3E2 898 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 GRASPQ7Z6J2 395 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 DNAJB7Q7Z6W7 309 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 ZNF677Q86XU0 584 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 NUP93Q8N1F7 819 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CLEC4CQ8WTT0 213 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 SLC35F5Q8WV83 523 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CPA5Q8WXQ8 436 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 SMG7Q92540 1137 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 NDRG1Q92597 394 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CPXM1Q96SM3 734 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CHP1Q99653 195 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 CORO1BQ9BR76 489 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 PRKD2Q9BZL6 878 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 UBE2ZQ9H832 354 aaPredicted RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 PIDD1Q9HB75 910 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 ST7Q9NRC1 585 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 TAS2R14Q9NYV8 317 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 IMPACTQ9P2X3 320 aa11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 DNMT3BQ9UBC3 853 aaKnown RBP11.36□□□□□ -0.59
CACNA1C-227ENST00000491104 DPP7Q9UHL4 492 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms