RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 E2F7Q96AV8 911 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 CYFIP2Q96F07 1278 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 NT5C1BQ96P26 610 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 SMOQ99835 787 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 CSNK1G1Q9HCP0 422 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 FBXL21Q9UKT6 434 aa16.32■□□□□ 0.2
VPS26A-207ENST00000490696 NUP210Q8TEM1 1887 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-207ENST00000490696 KRBA1A5PL33 1030 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 TNFRSF10BO14763 440 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 BEST1O76090 585 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 PRAMEF12O95522 483 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 PSMC3P17980 439 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
VPS26A-207ENST00000490696 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-207ENST00000490696 ADORA2BP29275 332 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 GRM2Q14416 872 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 TPD52L1Q16890 204 aaPredicted RBP16.31■□□□□ 0.2
VPS26A-207ENST00000490696 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 IER5LQ5T953 404 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 GPIHBP1Q8IV16 184 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 MFSD6LQ8IWD5 586 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 SIX5Q8N196 739 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 NUP93Q8N1F7 819 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 FBXL6Q8N531 539 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 MAB21L3Q8N8X9 362 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 EHBP1Q8NDI1 1231 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 DEPDC1BQ8WUY9 529 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 TMEM176AQ96HP8 235 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 OBP2AQ9NY56 170 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 EHD2Q9NZN4 543 aa16.31■□□□□ 0.2
VPS26A-207ENST00000490696 ZNF638Q14966 1978 aaKnown RBP16.31■□□□□ 0.2
VPS26A-207ENST00000490696 ANAPC1Q9H1A4 1944 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 FAM200BP0CF97 657 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 NPR3P17342 541 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 SLC5A3P53794 718 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 YWHAEP62258 255 aaKnown RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 PPP1R26Q5T8A7 1209 aaPredicted RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 CLEC20AQ6ZU45 233 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 CREBRFQ8IUR6 639 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 SCAMP5Q8TAC9 235 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 KAT5Q92993 513 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 HEXIM2Q96MH2 286 aaKnown RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 TRMT61BQ9BVS5 477 aaKnown RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 DNAI2Q9GZS0 605 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 INTS2Q9H0H0 1204 aaKnown RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 SMG9Q9H0W8 520 aaKnown RBP16.3■□□□□ 0.2
VPS26A-207ENST00000490696 ARHGEF3Q9NR81 526 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 TMEM63CQ9P1W3 806 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 CA14Q9ULX7 337 aa16.3■□□□□ 0.2
VPS26A-207ENST00000490696 F5P12259 2224 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 ZNF840PA6NDX5 716 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 RTN3O95197 1032 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-207ENST00000490696 ACO1P21399 889 aaKnown RBP16.29■□□□□ 0.2
VPS26A-207ENST00000490696 YWHAQP27348 245 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 AVPR1AP37288 418 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 MTIF2P46199 727 aaKnown RBP16.29■□□□□ 0.2
VPS26A-207ENST00000490696 MAP3K7CLP57077 242 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 PFKPQ01813 784 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 GCNT1Q02742 428 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 FCHO2Q0JRZ9 810 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 TAF10Q12962 218 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 ARHGAP17Q68EM7 881 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 ARHGEF19Q8IW93 802 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 FAM114A1Q8IWE2 563 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 PPM1KQ8N3J5 372 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 ENOX1Q8TC92 643 aaKnown RBP16.29■□□□□ 0.2
VPS26A-207ENST00000490696 USP13Q92995 863 aaPredicted RBP16.29■□□□□ 0.2
VPS26A-207ENST00000490696 SLC22A12Q96S37 553 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 GCNT4Q9P109 453 aa16.29■□□□□ 0.2
VPS26A-207ENST00000490696 MYH10P35580 1976 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 FAM92AA1XBS5 289 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 HHLA1C9JL84 531 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 ARNTLO00327 626 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 DPYSL4O14531 572 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 GDI1P31150 447 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 PPP3CCP48454 512 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 VCPP55072 806 aaKnown RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 IFRD2Q12894 506 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 MAN2A1Q16706 1144 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 SLC44A4Q53GD3 710 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 CWF19L1Q69YN2 538 aaKnown RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 ALYREFQ86V81 257 aaKnown RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 CELF5Q8N6W0 485 aaKnown RBP16.28■□□□□ 0.2
VPS26A-207ENST00000490696 DNASE1L2Q92874 299 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 IRF7Q92985 503 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 KREMEN1Q96MU8 473 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 SLITRK1Q96PX8 696 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 CYP2S1Q96SQ9 504 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 CRACR2AQ9BSW2 395 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 DUSP16Q9BY84 665 aa16.28■□□□□ 0.2
VPS26A-207ENST00000490696 MFSD1Q9H3U5 465 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms