RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 KBTBD4Q9NVX7 518 aa18.99■□□□□ 0.63
YIPF3-208ENST00000490447 PCDHGA5Q9Y5G8 931 aa18.99■□□□□ 0.63
YIPF3-208ENST00000490447 SPTBN2O15020 2390 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 ZNF638Q14966 1978 aaKnown RBP18.98■□□□□ 0.63
YIPF3-208ENST00000490447 CLSTN1O94985 981 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 TCF3P15923 654 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 GNL1P36915 607 aaPredicted RBP18.98■□□□□ 0.63
YIPF3-208ENST00000490447 PPP3CCP48454 512 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 LIMK1P53667 647 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 E2F4Q16254 413 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 MDH1BQ5I0G3 518 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 OR6B3Q8NGW1 331 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 ZC3H10Q96K80 434 aaKnown RBP18.98■□□□□ 0.63
YIPF3-208ENST00000490447 AGPAT3Q9NRZ7 376 aa18.98■□□□□ 0.63
YIPF3-208ENST00000490447 POLR3BQ9NW08 1133 aaPredicted RBP18.98■□□□□ 0.63
YIPF3-208ENST00000490447 K7ELQ4 463 aaPredicted RBP18.97■□□□□ 0.63
YIPF3-208ENST00000490447 RHOBTB1O94844 696 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 ABL1P00519 1130 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 MPLP40238 635 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 CYP2J2P51589 502 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 TRPC3Q13507 836 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 PLK5Q496M5 336 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 ZNF507Q8TCN5 953 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 CCDC127Q96BQ5 260 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 CGRRF1Q99675 332 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 LINC00597Q9H2U6 94 aa18.97■□□□□ 0.63
YIPF3-208ENST00000490447 UBE4BO95155 1302 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 F8VP50 259 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 LEFTY2O00292 366 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 CLIC2O15247 247 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 CUTAO60888 179 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 TACC1O75410 805 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 DGKEP52429 567 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 USP46P62068 366 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 SNRPFP62306 86 aaKnown RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 NOP14P78316 857 aaKnown RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 WDR72Q3MJ13 1102 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 TDRD10Q5VZ19 366 aaKnown RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 EPM2AIP1Q7L775 607 aaPredicted RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 NELFCDQ8IXH7 590 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 XXYLT1Q8NBI6 393 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 TSTD1Q8NFU3 115 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 C8orf48Q96LL4 319 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 SLITRK1Q96PX8 696 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 MRPL45Q9BRJ2 306 aaKnown RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 TTLL2Q9BWV7 592 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 MAGEF1Q9HAY2 307 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 VPS45Q9NRW7 570 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 TFIP11Q9UBB9 837 aaKnown RBP18.96■□□□□ 0.63
YIPF3-208ENST00000490447 EBF1Q9UH73 591 aa18.96■□□□□ 0.63
YIPF3-208ENST00000490447 CST3P01034 146 aaPredicted RBP18.95■□□□□ 0.62
YIPF3-208ENST00000490447 GBP1P32455 592 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 HOXD13P35453 343 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 SEC13P55735 322 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 CYP24A1Q07973 514 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 IFRD2Q12894 506 aaPredicted RBP18.95■□□□□ 0.62
YIPF3-208ENST00000490447 PSMD6Q15008 389 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 EZH1Q92800 747 aaPredicted RBP18.95■□□□□ 0.62
YIPF3-208ENST00000490447 ELOVL4Q9GZR5 314 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 CPQQ9Y646 472 aa18.95■□□□□ 0.62
YIPF3-208ENST00000490447 RALGAPA1Q6GYQ0 2036 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 ZNF840PA6NDX5 716 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 A8MXQ7 604 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 SLC9A3R1O14745 358 aaPredicted RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 TGFB1I1O43294 461 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 YEATS4O95619 227 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 FAM163BP0C2L3 166 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 PTPN1P18031 435 aaKnown RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 SLC7A9P82251 487 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 CREB5Q02930 508 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 USP39Q53GS9 565 aaKnown RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 C2orf27AQ580R0 203 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 PLA2G2CQ5R387 149 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 CNNM4Q6P4Q7 775 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 UNC13DQ70J99 1090 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 C11orf74Q86VG3 221 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 SYAP1Q96A49 352 aaPredicted RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 C7orf25Q9BPX7 421 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 DUSP15Q9H1R2 295 aaPredicted RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 SMOC1Q9H4F8 434 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 RXFP3Q9NSD7 469 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 SMPD4Q9NXE4 827 aa18.94■□□□□ 0.62
YIPF3-208ENST00000490447 CGNQ9P2M7 1197 aaKnown RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 NXF1Q9UBU9 619 aaKnown RBP18.94■□□□□ 0.62
YIPF3-208ENST00000490447 PHACTR2O75167 634 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 TAF10Q12962 218 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 STPG1Q5TH74 334 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 SHC4Q6S5L8 630 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 DDX42Q86XP3 938 aaKnown RBP eCLIP18.93■□□□□ 0.62
YIPF3-208ENST00000490447 KIAA1958Q8N8K9 716 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 B3GALNT2Q8NCR0 500 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 SCFD1Q8WVM8 642 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 CHAMP1Q96JM3 812 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 DPEP3Q9H4B8 488 aa18.93■□□□□ 0.62
YIPF3-208ENST00000490447 DCLK1O15075 740 aa18.92■□□□□ 0.62
YIPF3-208ENST00000490447 POLR2DO15514 142 aaKnown RBP18.92■□□□□ 0.62
YIPF3-208ENST00000490447 EXOC3O60645 756 aa18.92■□□□□ 0.62
YIPF3-208ENST00000490447 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
YIPF3-208ENST00000490447 MBL2P11226 248 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms