RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 NDUFV2P19404 249 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 CYP3A7P24462 503 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 GRK6P43250 576 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 UCNP55089 124 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 EVCP57679 992 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 FAM160A1Q05DH4 1040 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 NR1H3Q13133 447 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 PPP2R5CQ13362 524 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 PRPF4BQ13523 1007 aaKnown RBP7.9□□□□□ -1.14
COL9A1-209ENST00000489861 CTTNQ14247 550 aaKnown RBP7.9□□□□□ -1.14
COL9A1-209ENST00000489861 ADCK5Q3MIX3 580 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 ZC2HC1CQ53FD0 456 aaPredicted RBP7.9□□□□□ -1.14
COL9A1-209ENST00000489861 WDR45BQ5MNZ6 344 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 SYCP2LQ5T4T6 812 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 BROXQ5VW32 411 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 CDCA2Q69YH5 1023 aaPredicted RBP7.9□□□□□ -1.14
COL9A1-209ENST00000489861 PPP4R3AQ6IN85 833 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 C12orf40Q86WS4 652 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 ZNF248Q8NDW4 579 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 STKLD1Q8NE28 680 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 TBCKQ8TEA7 893 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 DYDC2Q96IM9 177 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 SEPT5Q99719 369 aaPredicted RBP7.9□□□□□ -1.14
COL9A1-209ENST00000489861 ADPGKQ9BRR6 497 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 SLC6A17Q9H1V8 727 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 ZMYM5Q9UJ78 669 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 HCN2Q9UL51 889 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 SLCO1B1Q9Y6L6 691 aa7.9□□□□□ -1.14
COL9A1-209ENST00000489861 NF1P21359 2839 aa7.9□□□□□ -1.15
COL9A1-209ENST00000489861 A0A0A0MRY4 1105 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 A0A1B0GVT2 93 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 ANO9A1A5B4 782 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 OR6C75A6NL08 312 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 KCNK3O14649 394 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 BCAT2O15382 392 aaPredicted RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SLC37A4O43826 429 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 NDUFS2O75306 463 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 TADA3O75528 432 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 KAT7O95251 611 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 CYP17A1P05093 508 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 LIG1P18858 919 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 MARCKSP29966 332 aaPredicted RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 RPL9P32969 192 aaKnown RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 WASP42768 502 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 ANAPC15P60006 121 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 DNAJC3Q13217 504 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SUZ12Q15022 739 aaKnown RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SF3A1Q15459 793 aaKnown RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 TMEM132AQ24JP5 1023 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 FBXL19Q6PCT2 694 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 IL27RAQ6UWB1 636 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 NEK8Q86SG6 692 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 MIB1Q86YT6 1006 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SLFN12Q8IYM2 578 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 C1orf216Q8TAB5 229 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 LRRC15Q8TF66 581 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 BSNDQ8WZ55 320 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 FOXJ1Q92949 421 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 ZFRQ96KR1 1074 aaKnown RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 CCDC113Q9H0I3 377 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 MIR1-1HGQ9H1L0 117 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 STARD5Q9NSY2 213 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 SLC38A7Q9NVC3 462 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 VPS54Q9P1Q0 977 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 DDX25Q9UHL0 483 aaKnown RBP7.89□□□□□ -1.15
COL9A1-209ENST00000489861 PCDHGA1Q9Y5H4 931 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 TCHHQ07283 1943 aa7.89□□□□□ -1.15
COL9A1-209ENST00000489861 OTOGQ6ZRI0 2925 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 STK36Q9NRP7 1315 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 A0A087WWV3 80 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 BLACEA4D250 179 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 MEI4A8MW99 385 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 BTBD18B2RXH4 712 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 ACKR2O00590 384 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 ZNF217O75362 1048 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 DGAT1O75907 488 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 NFATC1O95644 943 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 APODP05090 189 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 ITGB6P18564 788 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 DDX6P26196 483 aaKnown RBP eCLIP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 PDIA3P30101 505 aaKnown RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 CSNK1EP49674 416 aaKnown RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 PCBP4P57723 403 aaKnown RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 OSTNP61366 133 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 ZXDBP98169 803 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 TLE1Q04724 770 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 KDSRQ06136 332 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 DMP1Q13316 513 aaPredicted RBP7.88□□□□□ -1.15
COL9A1-209ENST00000489861 TRIM29Q14134 588 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 VEPH1Q14D04 833 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 EPHA7Q15375 998 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 NTRK3Q16288 839 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 KIF19Q2TAC6 998 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 DCAF4L1Q3SXM0 396 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 LINC00303Q3SY05 128 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 MGAT5BQ3V5L5 792 aa7.88□□□□□ -1.15
COL9A1-209ENST00000489861 NT5DC1Q5TFE4 455 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms