RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 EPHA5P54756 1037 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 GNG11P61952 73 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 CYP4F8P98187 520 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 SNRNP35Q16560 246 aaKnown RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 NFE2Q16621 373 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 BMT2Q1RMZ1 405 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 POTEHQ6S545 545 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 VITQ6UXI7 678 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 LRRTM3Q86VH5 581 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 TMC8Q8IU68 726 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 SPATA2LQ8IUW3 424 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 SCN4BQ8IWT1 228 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 TMEM86AQ8N2M4 240 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 TTC16Q8NEE8 873 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 DNASE1L2Q92874 299 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 E2F7Q96AV8 911 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 HPDLQ96IR7 371 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 HINFPQ9BQA5 517 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 NDST4Q9H3R1 872 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 AGPAT3Q9NRZ7 376 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 ZNHIT6Q9NWK9 470 aaKnown RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 CGNQ9P2M7 1197 aaKnown RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 HSFX1Q9UBD0 423 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 MTF2Q9Y483 593 aaPredicted RBP12.55□□□□□ -0.4
GGPS1-207ENST00000489692 C2orf16Q68DN1 1984 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 ZNF318Q5VUA4 2279 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 UBE4BO95155 1302 aa12.55□□□□□ -0.4
GGPS1-207ENST00000489692 EXOC3O60645 756 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 PHACTR2O75167 634 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 ATF6P18850 670 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 TARSP26639 723 aaKnown RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 CYLC1P35663 651 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 LHX1P48742 406 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 RPL10AP62906 217 aaKnown RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 TRPC3Q13507 836 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 SDHAF4Q5VUM1 108 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 ZC3H14Q6PJT7 736 aaKnown RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 GAREM2Q75VX8 874 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 EPM2AIP1Q7L775 607 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 ASCL5Q7RTU5 278 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 CREBRFQ8IUR6 639 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 ARID3BQ8IVW6 561 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 MFSD6LQ8IWD5 586 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 CCDC170Q8IYT3 715 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 XXYLT1Q8NBI6 393 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 OR5B17Q8NGF7 314 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 TTC8Q8TAM2 541 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 NELL2Q99435 816 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 KCTD10Q9H3F6 313 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 GTF3C4Q9UKN8 822 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 EPN1Q9Y6I3 576 aaPredicted RBP12.54□□□□□ -0.4
GGPS1-207ENST00000489692 PIAS3Q9Y6X2 628 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 R4GN57 208 aa12.54□□□□□ -0.4
GGPS1-207ENST00000489692 VWA8A3KMH1 1905 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 PRR23AA6NEV1 266 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 FANCGO15287 622 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 NDUFA10O95299 355 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 PDGFRBP09619 1106 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 GLULP15104 373 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TRIM21P19474 475 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 HOXD13P35453 343 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 AVPR1AP37288 418 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 GPR15P49685 360 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 PSMC1P62191 440 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TNNC1P63316 161 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 KRT83P78385 493 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 CSTF1Q05048 431 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 BIRC3Q13489 604 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 DDR2Q16832 855 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 ARHGAP29Q52LW3 1261 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 INTS6LQ5JSJ4 861 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 WDR59Q6PJI9 974 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 WDR49Q8IV35 697 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TOP6BLQ8N6T0 577 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 STKLD1Q8NE28 680 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 SCFD1Q8WVM8 642 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 FAM3CQ92520 227 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TSC1Q92574 1164 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 ACBD6Q9BR61 282 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 LRRC3Q9BY71 257 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 SNX25Q9H3E2 840 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TRPV4Q9HBA0 871 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TMLHEQ9NVH6 421 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 THG1LQ9NWX6 298 aaKnown RBP12.53□□□□□ -0.4
GGPS1-207ENST00000489692 SIX4Q9UIU6 781 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 MYO10Q9HD67 2058 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 PIEZO1Q92508 2521 aa12.53□□□□□ -0.4
GGPS1-207ENST00000489692 SLC38A8A6NNN8 435 aa12.52□□□□□ -0.41
GGPS1-207ENST00000489692 EIF3CLB5ME19 914 aaKnown RBP12.52□□□□□ -0.41
GGPS1-207ENST00000489692 PROB1E7EW31 1015 aa12.52□□□□□ -0.41
GGPS1-207ENST00000489692 PDXKO00764 312 aa12.52□□□□□ -0.41
GGPS1-207ENST00000489692 TGFB1I1O43294 461 aa12.52□□□□□ -0.41
GGPS1-207ENST00000489692 URI1O94763 535 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms