RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 ATP8B3O60423 1300 aa20.75■□□□□ 0.91
APTX-229ENST00000489583 LEFTY2O00292 366 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 EIF3DO15371 548 aaKnown RBP eCLIP20.74■□□□□ 0.91
APTX-229ENST00000489583 PHACTR2O75167 634 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 LMO2P25791 158 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 HOXC13P31276 330 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 SNRNP35Q16560 246 aaKnown RBP20.74■□□□□ 0.91
APTX-229ENST00000489583 PREPLQ4J6C6 727 aaPredicted RBP20.74■□□□□ 0.91
APTX-229ENST00000489583 MDH1BQ5I0G3 518 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 PLA2G2CQ5R387 149 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 NUDT18Q6ZVK8 323 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 CBWD2Q8IUF1 395 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 IQUBQ8NA54 791 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 OR5B17Q8NGF7 314 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 RIN3Q8TB24 985 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 ZNF396Q96N95 335 aaPredicted RBP20.74■□□□□ 0.91
APTX-229ENST00000489583 EDEM2Q9BV94 578 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 ELOVL4Q9GZR5 314 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 DUSP15Q9H1R2 295 aaPredicted RBP20.74■□□□□ 0.91
APTX-229ENST00000489583 LINC00597Q9H2U6 94 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 GCNT4Q9P109 453 aa20.74■□□□□ 0.91
APTX-229ENST00000489583 MORC2Q9Y6X9 1032 aaPredicted RBP20.74■□□□□ 0.91
APTX-229ENST00000489583 MAP3K13O43283 966 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 HCRTO43612 131 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 ADH1CP00326 375 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 SNRPFP62306 86 aaKnown RBP20.73■□□□□ 0.91
APTX-229ENST00000489583 IFRD2Q12894 506 aaPredicted RBP20.73■□□□□ 0.91
APTX-229ENST00000489583 WDR72Q3MJ13 1102 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 TRAPPC11Q7Z392 1133 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 KIAA1958Q8N8K9 716 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 CXorf38Q8TB03 319 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 KBTBD7Q8WVZ9 684 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 PCED1BQ96HM7 432 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 SPACA7Q96KW9 195 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 USP28Q96RU2 1077 aa20.73■□□□□ 0.91
APTX-229ENST00000489583 F8VP50 259 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 KHNYNO15037 678 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 KRT37O76014 449 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 APODP05090 189 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 FAM163BP0C2L3 166 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 TRIM21P19474 475 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 NOP14P78316 857 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 BYSLQ13895 437 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 N4BP2L1Q5TBK1 243 aaPredicted RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 NAIF1Q69YI7 327 aaPredicted RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 ANO7Q6IWH7 933 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 CYP2U1Q7Z449 544 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 PDZD8Q8NEN9 1154 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 CCDC127Q96BQ5 260 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 INTS4Q96HW7 963 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 FAM84AQ96KN4 292 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 C8orf48Q96LL4 319 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 FGFBP2Q9BYJ0 223 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 SMOC1Q9H4F8 434 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 POLMQ9NP87 494 aaPredicted RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 CRTAC1Q9NQ79 661 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 POLR3BQ9NW08 1133 aaPredicted RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 BCCIPQ9P287 314 aaKnown RBP eCLIP20.72■□□□□ 0.91
APTX-229ENST00000489583 TBC1D14Q9P2M4 693 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 CPQQ9Y646 472 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 DENND4CQ5VZ89 1909 aa20.72■□□□□ 0.91
APTX-229ENST00000489583 TPRP12270 2363 aaKnown RBP20.72■□□□□ 0.91
APTX-229ENST00000489583 ACACBO00763 2458 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 BCLAF3A2AJT9 711 aaKnown RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 A8MXQ7 604 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 DCLK1O15075 740 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 SPTLC2O15270 562 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 ZBTB24O43167 697 aaPredicted RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 STX6O43752 255 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 TACC1O75410 805 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 RTN3O95197 1032 aaPredicted RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 MBL2P11226 248 aaPredicted RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 PTPN1P18031 435 aaKnown RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 CYP2J2P51589 502 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 SLC7A9P82251 487 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 MRPS21P82921 87 aaKnown RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 CCDC142Q17RM4 750 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 FAM26FQ5R3K3 315 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 BTBD8Q5XKL5 378 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 FILIP1Q7Z7B0 1213 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 HSCBQ8IWL3 235 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 XXYLT1Q8NBI6 393 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 USP33Q8TEY7 942 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 SNX21Q969T3 373 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 SYAP1Q96A49 352 aaPredicted RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 DHX58Q96C10 678 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 PNKPQ96T60 521 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 CGRRF1Q99675 332 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 LSM14BQ9BX40 385 aaKnown RBP20.71■□□□□ 0.91
APTX-229ENST00000489583 TPSD1Q9BZJ3 242 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 NACA2Q9H009 215 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 SMPD4Q9NXE4 827 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 MMP17Q9ULZ9 603 aa20.71■□□□□ 0.91
APTX-229ENST00000489583 GREB1Q4ZG55 1949 aa20.7■□□□□ 0.91
APTX-229ENST00000489583 CACNA1BQ00975 2339 aa20.7■□□□□ 0.9
APTX-229ENST00000489583 ZNF840PA6NDX5 716 aa20.7■□□□□ 0.9
APTX-229ENST00000489583 KCNK5O95279 499 aa20.7■□□□□ 0.9
APTX-229ENST00000489583 YWHAQP27348 245 aa20.7■□□□□ 0.9
APTX-229ENST00000489583 DHPSP49366 369 aaPredicted RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms