RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 TBX21Q9UL17 535 aa8.93□□□□□ -0.98
VTI1A-207ENST00000489357 ZMYND8Q9ULU4 1186 aaPredicted RBP8.93□□□□□ -0.98
VTI1A-207ENST00000489357 NFS1Q9Y697 457 aa8.93□□□□□ -0.98
VTI1A-207ENST00000489357 RALGAPA2Q2PPJ7 1873 aa8.93□□□□□ -0.98
VTI1A-207ENST00000489357 A0A1B0GUA9 196 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 TRIM43BA6NCK2 446 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 KIAA0355O15063 1070 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 TJP3O95049 919 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ADH1CP00326 375 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 CST3P01034 146 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 KRT14P02533 472 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 KRT7P08729 469 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 RARAP10276 462 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 SYN1P17600 705 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 NR1D1P20393 614 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 GRM5P41594 1212 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 MARCKSL1P49006 195 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 TFAMQ00059 246 aaKnown RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 DHX9Q08211 1270 aaKnown RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ADCY2Q08462 1091 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 INCA1Q0VD86 236 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 BYSLQ13895 437 aaKnown RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 TRIM60Q495X7 471 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 CEP85LQ5SZL2 805 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 DENND2CQ68D51 928 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 LMBRD2Q68DH5 695 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 SPOPLQ6IQ16 392 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 DNAJC24Q6P3W2 148 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 MTHFD1LQ6UB35 978 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 MMS22LQ6ZRQ5 1243 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 TRIM43Q96BQ3 446 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 C18orf8Q96DM3 657 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 SNF8Q96H20 258 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 KCTD15Q96SI1 283 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 C11orf70Q9BRQ4 267 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ROPN1BQ9BZX4 212 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 PHACTR1Q9C0D0 580 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 RNPEPQ9H4A4 650 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ALG2Q9H553 416 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ROPN1Q9HAT0 212 aaPredicted RBP8.92□□□□□ -0.98
VTI1A-207ENST00000489357 ERVK-5Q9HDB9 667 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 GRHL1Q9NZI5 618 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 NR2E1Q9Y466 385 aa8.92□□□□□ -0.98
VTI1A-207ENST00000489357 NRCAMQ92823 1304 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ATXN2Q99700 1313 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 SIGLEC16A6NMB1 481 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 EIF3HO15372 352 aaKnown RBP eCLIP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 GFRA3O60609 400 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 RPLP2P05387 115 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 MYL3P08590 195 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 STAG3L1P0CL83 205 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 HARSP12081 509 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ITGB8P26012 769 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 RDXP35241 583 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 GABRB2P47870 512 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 IRAK1P51617 712 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 CLCN3P51790 818 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 PMS2P54278 862 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 RBP5P82980 135 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF844Q08AG5 666 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF268Q14587 947 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 PPP1R7Q15435 360 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 UAP1Q16222 522 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 TTMPQ5BVD1 217 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 HABP4Q5JVS0 413 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ZDHHC24Q6UX98 284 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 ERICH1Q86X53 443 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 VSIG1Q86XK7 387 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 THNSL1Q8IYQ7 743 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 IPO4Q8TEX9 1081 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 UBLCP1Q8WVY7 318 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 RIN2Q8WYP3 895 aaPredicted RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 VWCEQ96DN2 955 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 TRIM51Q9BSJ1 452 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 KATNAL1Q9BW62 490 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 CELF4Q9BZC1 486 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 OSBPL8Q9BZF1 889 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 PDZD7Q9H5P4 517 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 PPCSQ9HAB8 311 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 GTF2IRD1Q9UHL9 959 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 GGA2Q9UJY4 613 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 DRG1Q9Y295 367 aaKnown RBP8.91□□□□□ -0.98
VTI1A-207ENST00000489357 WASF2Q9Y6W5 498 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 SCN5AQ14524 2016 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 TRIOBPQ9H2D6 2365 aa8.91□□□□□ -0.98
VTI1A-207ENST00000489357 SMIM35A0A1B0GVV1 85 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 MBLAC1A4D2B0 266 aaPredicted RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 J3QL48 77 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 XPOTO43592 962 aaKnown RBP8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TSPAN1O60635 241 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 CILPO75339 1184 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 TCEA3O75764 348 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 CLTBP09497 229 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 FAM163BP0C2L3 166 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 ZNF286BP0CG31 522 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 SETSIPP0DME0 302 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 VDRP11473 427 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 DESP17661 470 aa8.9□□□□□ -0.98
VTI1A-207ENST00000489357 ATP5DP30049 168 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms