RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 KCTD17Q8N5Z5 321 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 OR2I1PQ8NGU4 316 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 PNKPQ96T60 521 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 PKMYT1Q99640 499 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.37■□□□□ 0.37
USP48-210ENST00000489108 ODF2LQ9ULJ1 636 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 L1RE1Q9UN81 338 aa17.37■□□□□ 0.37
USP48-210ENST00000489108 GCN1Q92616 2671 aaKnown RBP17.36■□□□□ 0.37
USP48-210ENST00000489108 LEFTY2O00292 366 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 TULP1O00294 542 aaPredicted RBP17.36■□□□□ 0.37
USP48-210ENST00000489108 TRAK2O60296 914 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 ADAM23O75077 832 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 FAM13AO94988 1023 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 CYP17A1P05093 508 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 SERPINF2P08697 491 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 SCP2P22307 547 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 DHCR24Q15392 516 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 EOGTQ5NDL2 527 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 SCARA3Q6AZY7 606 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 CRELD2Q6UXH1 353 aaPredicted RBP17.36■□□□□ 0.37
USP48-210ENST00000489108 FILIP1Q7Z7B0 1213 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 MINDY1Q8N5J2 469 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 CEP76Q8TAP6 659 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 COL26A1Q96A83 441 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 ZNF560Q96MR9 790 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 CAMK1GQ96NX5 476 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 LLPHQ9BRT6 129 aaKnown RBP17.36■□□□□ 0.37
USP48-210ENST00000489108 CAPN10Q9HC96 672 aa17.36■□□□□ 0.37
USP48-210ENST00000489108 AGO2Q9UKV8 859 aaKnown RBP17.36■□□□□ 0.37
USP48-210ENST00000489108 PLXNB3Q9ULL4 1909 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 TCRBV21S2A2A0A5A6 115 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 SCAMP3O14828 347 aaKnown RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 HCRTO43612 131 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 KAT7O95251 611 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 ZIC2O95409 532 aaPredicted RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 APODP05090 189 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 HOXD12P35452 270 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 KIR2DL1P43626 348 aaPredicted RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 ZNF131P52739 623 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 ATP2C1P98194 919 aaPredicted RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 GTF2BQ00403 316 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 MYL7Q01449 175 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 HSF5Q4G112 596 aaPredicted RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 TMEM119Q4V9L6 283 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 OSTM1Q86WC4 334 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 GPBP1Q86WP2 473 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 C12orf40Q86WS4 652 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 SPATA2LQ8IUW3 424 aaPredicted RBP17.35■□□□□ 0.37
USP48-210ENST00000489108 FAM184AQ8NB25 1140 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 SPATA18Q8TC71 538 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 FIZ1Q96SL8 496 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 IKZF4Q9H2S9 585 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 ZHX3Q9H4I2 956 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 PARVGQ9HBI0 331 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 AGAP1Q9UPQ3 857 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
USP48-210ENST00000489108 IGSF10Q6WRI0 2623 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 A0A0A0MRY4 1105 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 VWA3AA6NCI4 1184 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 AP5Z1O43299 807 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 SH3BP5O60239 455 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 HUS1O60921 280 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 POLR2BP30876 1174 aaKnown RBP17.34■□□□□ 0.37
USP48-210ENST00000489108 PNPLA4P41247 253 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 RPL6Q02878 288 aaKnown RBP17.34■□□□□ 0.37
USP48-210ENST00000489108 HNRNPDQ14103 355 aaKnown RBP17.34■□□□□ 0.37
USP48-210ENST00000489108 TRIP6Q15654 476 aaKnown RBP17.34■□□□□ 0.37
USP48-210ENST00000489108 CFAP221Q4G0U5 840 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 SLFN12LQ6IEE8 588 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 RHBDF2Q6PJF5 856 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 PNPLA1Q8N8W4 532 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 RNF38Q9H0F5 515 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 STYXL1Q9Y6J8 313 aa17.34■□□□□ 0.37
USP48-210ENST00000489108 SETXQ7Z333 2677 aaKnown RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 ARHGAP33O14559 1287 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 ITGB3P05106 788 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 TNFRSF4P43489 277 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 PDE6CP51160 858 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 WNT7BP56706 349 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 HMGN5P82970 282 aaKnown RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 POU5F1Q01860 360 aaKnown RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 ZNF33AQ06730 810 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 TMEM86AQ8N2M4 240 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 HNRNPLLQ8WVV9 542 aaKnown RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 BBC3Q96PG8 261 aaPredicted RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 CCDC86Q9H6F5 360 aaKnown RBP17.33■□□□□ 0.36
USP48-210ENST00000489108 ARHGEF4Q9NR80 690 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 TRPM5Q9NZQ8 1165 aa17.33■□□□□ 0.36
USP48-210ENST00000489108 ATP2C2O75185 946 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 IL18RAPO95256 599 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 EIF2DP41214 584 aaKnown RBP17.32■□□□□ 0.36
USP48-210ENST00000489108 GRIA2P42262 883 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 MAGEA11P43364 429 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 USP46P62068 366 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 SLC7A9P82251 487 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 TFAMQ00059 246 aaKnown RBP17.32■□□□□ 0.36
USP48-210ENST00000489108 KDSRQ06136 332 aa17.32■□□□□ 0.36
USP48-210ENST00000489108 RESTQ13127 1097 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms