RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 THG1LQ9NWX6 298 aaKnown RBP18.88■□□□□ 0.61
ITGB1-215ENST00000488494 GTSE1Q9NYZ3 720 aa18.88■□□□□ 0.61
ITGB1-215ENST00000488494 ZFHX2Q9C0A1 2572 aaPredicted RBP18.88■□□□□ 0.61
ITGB1-215ENST00000488494 TRIM49BA6NDI0 452 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 MAGEA9P43362 315 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 PMS1P54277 932 aaKnown RBP18.87■□□□□ 0.61
ITGB1-215ENST00000488494 IFRD2Q12894 506 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-215ENST00000488494 ZNF268Q14587 947 aaPredicted RBP18.87■□□□□ 0.61
ITGB1-215ENST00000488494 WDR87Q6ZQQ6 2873 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 ADSSL1Q8N142 457 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 ZNF687Q8N1G0 1237 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 TTC16Q8NEE8 873 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 CLDN23Q96B33 292 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 MSANTD3Q96H12 275 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 TTLL2Q9BWV7 592 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 GTPBP4Q9BZE4 634 aaKnown RBP18.87■□□□□ 0.61
ITGB1-215ENST00000488494 NIF3L1Q9GZT8 377 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 EHD2Q9NZN4 543 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 MAN1B1Q9UKM7 699 aa18.87■□□□□ 0.61
ITGB1-215ENST00000488494 SPECC1L-ADORA2AF8WAN1 911 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 NCAM2O15394 837 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 GFRA3O60609 400 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 USP17L7P0C7H9 530 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 CCDC130P13994 396 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 GTF2H1P32780 548 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 CTHP32929 405 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 RPS9P46781 194 aaKnown RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 MXI1P50539 228 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 USP4Q13107 963 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 DCAF17Q5H9S7 520 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 ANKRD40Q6AI12 368 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 ISM2Q6H9L7 571 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 ZC3H3Q8IXZ2 948 aaKnown RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 SMARCD1Q96GM5 515 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 CYP2S1Q96SQ9 504 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 C8orf33Q9H7E9 229 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 DMAP1Q9NPF5 467 aaPredicted RBP18.86■□□□□ 0.61
ITGB1-215ENST00000488494 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
ITGB1-215ENST00000488494 HELZP42694 1942 aaKnown RBP18.85■□□□□ 0.61
ITGB1-215ENST00000488494 PROB1E7EW31 1015 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 PSMA7O14818 248 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 LAMTOR5O43504 91 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 SP9P0CG40 484 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 MLLT6P55198 1093 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-215ENST00000488494 LRRC63Q05C16 580 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 INCA1Q0VD86 236 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 FZD5Q13467 585 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 STIM1Q13586 685 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 MTF1Q14872 753 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 ITPRIPL2Q3MIP1 535 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 KRT39Q6A163 491 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 TRIM68Q6AZZ1 485 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 CC2D1AQ6P1N0 951 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-215ENST00000488494 TXNDC11Q6PKC3 985 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 UNC93AQ86WB7 457 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 MAML2Q8IZL2 1156 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-215ENST00000488494 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 ARL14EPQ8N8R7 260 aaPredicted RBP18.85■□□□□ 0.61
ITGB1-215ENST00000488494 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 SLC2A14Q8TDB8 520 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 KCNK16Q96T55 309 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 GKN1Q9NS71 199 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 TRPM5Q9NZQ8 1165 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 GCNT4Q9P109 453 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 DMDP11532 3685 aa18.85■□□□□ 0.61
ITGB1-215ENST00000488494 FRYLO94915 3013 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 STX10O60499 249 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 AP1G2O75843 785 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 CD58P19256 250 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 FKBP3Q00688 224 aaKnown RBP18.84■□□□□ 0.61
ITGB1-215ENST00000488494 TAF10Q12962 218 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 MTAPQ13126 283 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 ZNF77Q15935 545 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 TCERG1LQ5VWI1 586 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 C1orf228Q6PIY5 440 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 PAQR9Q6ZVX9 377 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 RALGPS2Q86X27 583 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-215ENST00000488494 ELOA2Q8IYF1 753 aaPredicted RBP18.84■□□□□ 0.61
ITGB1-215ENST00000488494 SEMA4DQ92854 862 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 TWNKQ96RR1 684 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 FAM83CQ9BQN1 747 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 CHRDQ9H2X0 955 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 EBF3Q9H4W6 596 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 HPS4Q9NQG7 708 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 R4GN57 208 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 ANAPC1Q9H1A4 1944 aa18.84■□□□□ 0.61
ITGB1-215ENST00000488494 ZNF638Q14966 1978 aaKnown RBP18.83■□□□□ 0.61
ITGB1-215ENST00000488494 ZNF840PA6NDX5 716 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 PRR23AA6NEV1 266 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 ARSAP15289 507 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CD44P16070 742 aaKnown RBP18.83■□□□□ 0.6
ITGB1-215ENST00000488494 ADORA2BP29275 332 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 PDE6CP51160 858 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 SLC5A3P53794 718 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 MCCD1P59942 119 aaPredicted RBP18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CBWD6Q4V339 395 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CBWD3Q5JTY5 395 aa18.83■□□□□ 0.6
ITGB1-215ENST00000488494 CBWD5Q5RIA9 395 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms