RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ZSWIM1Q9BR11 485 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 KCNF1Q9H3M0 494 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 PLEKHA4Q9H4M7 779 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 LRRC4Q9HBW1 653 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 KCND1Q9NSA2 647 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 SPTLC3Q9NUV7 552 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ABI2Q9NYB9 513 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-242ENST00000488013 LMCD1Q9NZU5 365 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ADAM22Q9P0K1 906 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 MTUS1Q9ULD2 1270 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 NENFQ9UMX5 172 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 ADGRG1Q9Y653 693 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 SCINQ9Y6U3 715 aa11.66□□□□□ -0.54
HDLBP-242ENST00000488013 MTMR11A4FU01 709 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 C2orf71A6NGG8 1288 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 BTNL10A8MVZ5 291 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 KRT86O43790 486 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 GLUD1P00367 558 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 CNPP09543 421 aaKnown RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 HAPLN1P10915 354 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 DESP17661 470 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 BDNFP23560 247 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 MSNP26038 577 aaKnown RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 KLRC2P26717 231 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 CA8P35219 290 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 GABRB2P47870 512 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ALDH1A3P47895 512 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 GSCP56915 257 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 PDE4CQ08493 712 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 VEPH1Q14D04 833 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 CLEC20AQ6ZU45 233 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 TOGARAM2Q6ZUX3 1019 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 PAQR9Q6ZVX9 377 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 TTC30AQ86WT1 665 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 RHOT2Q8IXI1 618 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 TCEAL8Q8IYN2 117 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 SIX6OS1Q8N1H7 587 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 SCML4Q8N228 414 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 RNF10Q8N5U6 811 aaKnown RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 UBA3Q8TBC4 463 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 CPA5Q8WXQ8 436 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ARNTL2Q8WYA1 636 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ZNF830Q96NB3 372 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 KLHL5Q96PQ7 755 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 SLC4A5Q9BY07 1137 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 FBXO44Q9H4M3 255 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 AVENQ9NQS1 362 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-242ENST00000488013 CNGB3Q9NQW8 809 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ST7Q9NRC1 585 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 PARVAQ9NVD7 372 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 UVRAGQ9P2Y5 699 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ZKSCAN5Q9Y2L8 839 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ASB3Q9Y575 518 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.65□□□□□ -0.549e-6■□□□□ 11.3
HDLBP-242ENST00000488013 CEP290O15078 2479 aa11.65□□□□□ -0.54
HDLBP-242ENST00000488013 ANK1P16157 1881 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 A0A0A6YYK5 440 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-242ENST00000488013 WDR27A2RRH5 827 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 PRRG1O14668 218 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 GRM6O15303 877 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 PJA2O43164 708 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 HCRTO43612 131 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 RTN3O95197 1032 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-242ENST00000488013 TUBB4AP04350 444 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 GLI1P08151 1106 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 SRGAP2BP0DMP2 458 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 MAP3K7CLP57077 242 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ERVFC1P60507 584 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ADCY1Q08828 1119 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 TCEAL1Q15170 157 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 MGAT5BQ3V5L5 792 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ARHGAP29Q52LW3 1261 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 RSPO2Q6UXX9 243 aaPredicted RBP11.64□□□□□ -0.55
HDLBP-242ENST00000488013 RNF19BQ6ZMZ0 732 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 MON1BQ7L1V2 547 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ARCQ7LC44 396 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ITIH5Q86UX2 942 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 PIGZQ86VD9 579 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 GPIHBP1Q8IV16 184 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ARHGAP18Q8N392 663 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 WDTC1Q8N5D0 677 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 ATAD1Q8NBU5 361 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 IRGQQ8WZA9 623 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 GOLGA1Q92805 767 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 MRPL38Q96DV4 380 aaKnown RBP11.64□□□□□ -0.55
HDLBP-242ENST00000488013 TMEM209Q96SK2 561 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 TMLHEQ9NVH6 421 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 PPP2R2CQ9Y2T4 447 aa11.64□□□□□ -0.55
HDLBP-242ENST00000488013 TMCO5BA8MYB1 307 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 F8VP50 259 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 CLDN5O00501 218 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 NCK2O43639 380 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 OR4Q2P0C623 313 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 CYP2F1P24903 491 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 PPP3CCP48454 512 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 EPHB3P54753 998 aa11.63□□□□□ -0.55
HDLBP-242ENST00000488013 GALCP54803 685 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms