RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 SMARCD2Q92925 531 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 TASP1Q9H6P5 420 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ZNF334Q9HCZ1 680 aaPredicted RBP15.5■□□□□ 0.07
LIMS3-205ENST00000487150 PLCB1Q9NQ66 1216 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 TRPM5Q9NZQ8 1165 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 LIMD1Q9UGP4 676 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 CNTN6Q9UQ52 1028 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 A0A0C4DFX4 3053 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 TTC28Q96AY4 2481 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DENND4AQ7Z401 1863 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DLL1O00548 723 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 ACO1P21399 889 aaKnown RBP15.49■□□□□ 0.07
LIMS3-205ENST00000487150 YWHAQP27348 245 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 AVPR1AP37288 418 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 CCR2P41597 374 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 COPB1P53618 953 aaKnown RBP15.49■□□□□ 0.07
LIMS3-205ENST00000487150 SLC5A3P53794 718 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 MAP3K7CLP57077 242 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 BST2Q10589 180 aaKnown RBP15.49■□□□□ 0.07
LIMS3-205ENST00000487150 TDGQ13569 410 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 HTR4Q13639 388 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 TEAD2Q15562 447 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 GPR158Q5T848 1215 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 GAREM2Q75VX8 874 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DHX40Q8IX18 779 aaKnown RBP15.49■□□□□ 0.07
LIMS3-205ENST00000487150 ANKRD52Q8NB46 1076 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 FEZF2Q8TBJ5 459 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 GPR152Q8TDT2 470 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DEPDC1BQ8WUY9 529 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 TCEAL4Q96EI5 215 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 ASB16Q96NS5 453 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DUSP16Q9BY84 665 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 UBXN6Q9BZV1 441 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 VPS16Q9H269 839 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 KIF9Q9HAQ2 790 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 TRPV4Q9HBA0 871 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 IL21Q9HBE4 155 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 ZFP14Q9HCL3 533 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 OBP2AQ9NY56 170 aa15.49■□□□□ 0.07
LIMS3-205ENST00000487150 DPYSL4O14531 572 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 SLC9A1P19634 815 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 TUBP50607 506 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 CDR1P51861 262 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 ZNF132P52740 706 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 BPIFB4P59827 614 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 GOLGA7BQ2TAP0 167 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 PPP1R26Q5T8A7 1209 aaPredicted RBP15.48■□□□□ 0.07
LIMS3-205ENST00000487150 SDHAF4Q5VUM1 108 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 CLEC20AQ6ZU45 233 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 PAQR9Q6ZVX9 377 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 ZSCAN18Q8TBC5 510 aaPredicted RBP15.48■□□□□ 0.07
LIMS3-205ENST00000487150 SHC3Q92529 594 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 FBXO32Q969P5 355 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 ELSPBP1Q96BH3 223 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 KREMEN1Q96MU8 473 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 NUMBLQ9Y6R0 609 aa15.48■□□□□ 0.07
LIMS3-205ENST00000487150 TRAV19A0A0A6YYK7 116 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 O00370 1275 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 MOSPD3O75425 235 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 F11P03951 625 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 PFKPQ01813 784 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 UBXN1Q04323 297 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 PTK2Q05397 1052 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 CNGA2Q16280 664 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 LCLAT1Q6UWP7 414 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 TADA2BQ86TJ2 420 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 MON1AQ86VX9 555 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 ARHGAP18Q8N392 663 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 PCMTD1Q96MG8 357 aaPredicted RBP15.47■□□□□ 0.07
LIMS3-205ENST00000487150 SMOQ99835 787 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
LIMS3-205ENST00000487150 CD320Q9NPF0 282 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 MUTYHQ9UIF7 546 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 DNAJC12Q9UKB3 198 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 TSPAN16Q9UKR8 245 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 DUSP12Q9UNI6 340 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 CEP83Q9Y592 693 aa15.47■□□□□ 0.07
LIMS3-205ENST00000487150 FAM92AA1XBS5 289 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 PI4K2BG5E9Z4 385 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 XPO1O14980 1071 aaKnown RBP15.46■□□□□ 0.07
LIMS3-205ENST00000487150 TPM3P06753 285 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 SRFP11831 508 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 UCHL3P15374 230 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 GNA15P30679 374 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 PSEN1P49768 467 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 CACNA2D1P54289 1103 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 CYP4F8P98187 520 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 RAPGEF1Q13905 1077 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 ZNF268Q14587 947 aaPredicted RBP15.46■□□□□ 0.07
LIMS3-205ENST00000487150 ARHGAP44Q17R89 818 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 FAM78AQ5JUQ0 283 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 KLHDC7AQ5VTJ3 777 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 CMTM8Q8IZV2 173 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 NEK11Q8NG66 645 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 KAT5Q92993 513 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 ERGIC2Q96RQ1 377 aa15.46■□□□□ 0.07
LIMS3-205ENST00000487150 CDK5RAP1Q96SZ6 601 aaKnown RBP15.46■□□□□ 0.07
LIMS3-205ENST00000487150 KCNK16Q96T55 309 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms