RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 CILPO75339 1184 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 CD72P21854 359 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 WEE1P30291 646 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 ZNF394Q53GI3 561 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 CLEC17AQ6ZS10 378 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 PAQR9Q6ZVX9 377 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 FUKQ8N0W3 1084 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 CRYBG2Q8N1P7 616 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 CSGALNACT1Q8TDX6 532 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 ZFYVE19Q96K21 471 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 LRRC3BQ96PB8 259 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 SRRTQ9BXP5 876 aaKnown RBP23.77■■□□□ 1.4
CDHR3-212ENST00000487084 DNAI2Q9GZS0 605 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 TRPM5Q9NZQ8 1165 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 CCL26Q9Y258 94 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 SIT1Q9Y3P8 196 aa23.77■■□□□ 1.4
CDHR3-212ENST00000487084 TRAV19A0A0A6YYK7 116 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 KANSL1LA0AUZ9 987 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 CHADO15335 359 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 GALR2O43603 387 aaPredicted RBP23.76■■□□□ 1.39
CDHR3-212ENST00000487084 CKMP06732 381 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 DCNP07585 359 aaKnown RBP23.76■■□□□ 1.39
CDHR3-212ENST00000487084 FCHO2Q0JRZ9 810 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 FOXR2Q6PJQ5 311 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 PJA1Q8NG27 643 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 USP13Q92995 863 aaPredicted RBP23.76■■□□□ 1.39
CDHR3-212ENST00000487084 TATDN2Q93075 761 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 ARID3AQ99856 593 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 TTLL2Q9BWV7 592 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 NUP62CLQ9H1M0 184 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 TDP1Q9NUW8 608 aa23.76■■□□□ 1.39
CDHR3-212ENST00000487084 NUP210Q8TEM1 1887 aaPredicted RBP23.75■■□□□ 1.39
CDHR3-212ENST00000487084 C2orf78A6NCI8 922 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 SOBPA7XYQ1 873 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 GNA14O95837 355 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 ABL1P00519 1130 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 FMO5P49326 533 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 NUBP1P53384 320 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 PTPN5P54829 565 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 LRMPQ12912 555 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 TAF10Q12962 218 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 ARHGAP29Q52LW3 1261 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 NUP93Q8N1F7 819 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 ARL14EPQ8N8R7 260 aaPredicted RBP23.75■■□□□ 1.39
CDHR3-212ENST00000487084 TTC8Q8TAM2 541 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 WHAMMQ8TF30 809 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 SLITRK1Q96PX8 696 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 CYP2S1Q96SQ9 504 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 CISHQ9NSE2 258 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 LMBRD1Q9NUN5 540 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 THG1LQ9NWX6 298 aaKnown RBP23.75■■□□□ 1.39
CDHR3-212ENST00000487084 COQ4Q9Y3A0 265 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 PIAS3Q9Y6X2 628 aa23.75■■□□□ 1.39
CDHR3-212ENST00000487084 RTN3O95197 1032 aaPredicted RBP23.74■■□□□ 1.39
CDHR3-212ENST00000487084 USP17L7P0C7H9 530 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 FAM200BP0CF97 657 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 YWHAQP27348 245 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 PLA2G5P39877 138 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 SLC5A3P53794 718 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 MAP3K7CLP57077 242 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 TCF15Q12870 199 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 ZNF852Q6ZMS4 543 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 CREBRFQ8IUR6 639 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 FBXO32Q969P5 355 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 JAKMIP2Q96AA8 810 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 CYFIP2Q96F07 1278 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 SLC22A12Q96S37 553 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 SMOQ99835 787 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 DDX23Q9BUQ8 820 aaKnown RBP23.74■■□□□ 1.39
CDHR3-212ENST00000487084 KIF9Q9HAQ2 790 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 LTB4R2Q9NPC1 389 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 TRPV5Q9NQA5 729 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 RWDD2AQ9UIY3 292 aa23.74■■□□□ 1.39
CDHR3-212ENST00000487084 FAM170BA6NMN3 283 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 ARNTLO00327 626 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 FGFR1OPO95684 399 aaKnown RBP23.73■■□□□ 1.39
CDHR3-212ENST00000487084 KPNA1P52294 538 aaPredicted RBP23.73■■□□□ 1.39
CDHR3-212ENST00000487084 CCDC105Q8IYK2 499 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 DTWD2Q8NBA8 298 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 SCAMP5Q8TAC9 235 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 FAXDC2Q96IV6 333 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 HEXIM2Q96MH2 286 aaKnown RBP23.73■■□□□ 1.39
CDHR3-212ENST00000487084 MRPS17Q9Y2R5 130 aaKnown RBP23.73■■□□□ 1.39
CDHR3-212ENST00000487084 MTF2Q9Y483 593 aaPredicted RBP23.73■■□□□ 1.39
CDHR3-212ENST00000487084 OBSL1O75147 1896 aa23.73■■□□□ 1.39
CDHR3-212ENST00000487084 ZNF840PA6NDX5 716 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 H0Y858 1186 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 BEST1O76090 585 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 HDCP19113 662 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 PPP3CCP48454 512 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 PLCB2Q00722 1185 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 CETN1Q12798 172 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 CUL2Q13617 745 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 CC2D1AQ6P1N0 951 aaPredicted RBP23.72■■□□□ 1.39
CDHR3-212ENST00000487084 TTC39CQ8N584 583 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 ZMIZ2Q8NF64 920 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 HNRNPABQ99729 332 aaKnown RBP23.72■■□□□ 1.39
CDHR3-212ENST00000487084 GTSE1Q9NYZ3 720 aa23.72■■□□□ 1.39
CDHR3-212ENST00000487084 NDRG2Q9UN36 371 aaKnown RBP23.72■■□□□ 1.39
CDHR3-212ENST00000487084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms