RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 PDK4Q16654 411 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
PTCD2-204ENST00000486995 C3orf62Q6ZUJ4 267 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 ASRGL1Q7L266 308 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 FAM71DQ8N9W8 422 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PEBP4Q96S96 227 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 MMP19Q99542 508 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 SLCO1B3Q9NPD5 702 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 PHTF1Q9UMS5 762 aa12.92□□□□□ -0.34
PTCD2-204ENST00000486995 IGF2BP3O00425 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 RNF8O76064 485 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 HMGCRP04035 888 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 MCF2P10911 925 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 KRT4P19013 534 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CA4P22748 312 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ATICP31939 592 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 RDXP35241 583 aaKnown RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 NRLP54845 237 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 EIF3EP60228 445 aaKnown RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 IGBP1P78318 339 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CCDC15Q0P6D6 951 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 FAM187BQ17R55 369 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 SLC10A6Q3KNW5 377 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 PREPLQ4J6C6 727 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 SH3PXD2AQ5TCZ1 1133 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ADGRD1Q6QNK2 874 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ATP11CQ8NB49 1132 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 FBXO36Q8NEA4 188 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 UBA3Q8TBC4 463 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 PDZD7Q9H5P4 517 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CYP3A43Q9HB55 503 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 BAIAP2L1Q9UHR4 511 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 A0A087WZ62 844 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CXCL11O14625 94 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 HGSO14964 777 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ENDOD1O94919 500 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 RBP3P10745 1247 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 VDRP11473 427 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 INSRRP14616 1297 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 PHBP35232 272 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 PCK1P35558 622 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ZNF143P52747 638 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 POU5F1BQ06416 359 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 MMRN1Q13201 1228 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 MTM1Q13496 603 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 MOGSQ13724 837 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 DPYSL3Q14195 570 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 RAB6CQ53S08 254 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 TRNP1Q6NT89 227 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CEP57Q86XR8 500 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 KIF2BQ8N4N8 673 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 NLGN2Q8NFZ4 835 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 KLHL29Q96CT2 875 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CPB2Q96IY4 423 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 HEXIM2Q96MH2 286 aaKnown RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 PPP1R16BQ96T49 567 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 FDXACB1Q9BRP7 624 aaPredicted RBP12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ADPGKQ9BRR6 497 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 CALN1Q9BXU9 219 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 RAB6CQ9H0N0 254 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ASB7Q9H672 318 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ACSS3Q9H6R3 686 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ASNSD1Q9NWL6 643 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 ERAP1Q9NZ08 941 aa12.91□□□□□ -0.34
PTCD2-204ENST00000486995 FGFR1P11362 822 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 CYP3A5P20815 502 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 PHKA2P46019 1235 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 TNFAIP2Q03169 654 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
PTCD2-204ENST00000486995 FAM102AQ5T9C2 384 aaPredicted RBP12.9□□□□□ -0.34
PTCD2-204ENST00000486995 NPNTQ6UXI9 565 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 ERO1BQ86YB8 467 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 SPATA18Q8TC71 538 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 MZB1Q8WU39 189 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 THOC1Q96FV9 657 aaKnown RBP12.9□□□□□ -0.34
PTCD2-204ENST00000486995 HPDLQ96IR7 371 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 PAFAH2Q99487 392 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 RSAD1Q9HA92 442 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 SSU72Q9NP77 194 aaKnown RBP12.9□□□□□ -0.34
PTCD2-204ENST00000486995 XPO7Q9UIA9 1087 aaKnown RBP12.9□□□□□ -0.34
PTCD2-204ENST00000486995 TRIM33Q9UPN9 1127 aa12.9□□□□□ -0.34
PTCD2-204ENST00000486995 EDF1O60869 148 aaKnown RBP12.9□□□□□ -0.35
PTCD2-204ENST00000486995 CCNB1P14635 433 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 SLC8A1P32418 973 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 IREB2P48200 963 aaKnown RBP12.9□□□□□ -0.35
PTCD2-204ENST00000486995 TTLL4Q14679 1199 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 BBS9Q3SYG4 887 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 MOB2Q70IA6 237 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 LINC01465Q8N7H1 131 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 PAPPA2Q9BXP8 1791 aa12.9□□□□□ -0.35
PTCD2-204ENST00000486995 C2CD4BA6NLJ0 364 aa12.89□□□□□ -0.35
PTCD2-204ENST00000486995 SMAPO00193 183 aa12.89□□□□□ -0.35
PTCD2-204ENST00000486995 MCF2LO15068 1137 aa12.89□□□□□ -0.35
PTCD2-204ENST00000486995 DDNO94850 711 aaPredicted RBP12.89□□□□□ -0.35
PTCD2-204ENST00000486995 KRT16P08779 473 aa12.89□□□□□ -0.35
PTCD2-204ENST00000486995 ARF4P18085 180 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms