RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MLH1P40692 756 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 ALDH7A1P49419 539 aaKnown RBP15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 RWDD2BP57060 319 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 RNASE9P60153 205 aaKnown RBP15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 RNASELQ05823 741 aaKnown RBP15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 SOWAHAQ2M3V2 549 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 TIGD5Q53EQ6 642 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 SEL1L2Q5TEA6 688 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 DCAF12L1Q5VU92 463 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 C8orf74Q6P047 294 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 KCNT2Q6UVM3 1135 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 PHLDB2Q86SQ0 1253 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 TOP6BLQ8N6T0 577 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 APPL2Q8NEU8 664 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 POF1BQ8WVV4 589 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 ALG3Q92685 438 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 C18orf8Q96DM3 657 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 ZNF558Q96NG5 402 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 GAD1Q99259 594 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 MIS12Q9H081 205 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 GOLGA2P5Q9HBQ8 144 aa15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.39■□□□□ 0.05
POLR2J3-204ENST00000486319 TMEM191CA6NGB0 347 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 ARL5CA6NH57 179 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 A8MXQ7 604 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 HUS1O60921 280 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 GPD2P43304 727 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 LILRA4P59901 499 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PTPN20Q4JDL3 420 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 LLGL2Q6P1M3 1020 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 DCUN1D2Q6PH85 259 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 LIMS2Q7Z4I7 341 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 GSTCDQ8NEC7 633 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 HNRNPLLQ8WVV9 542 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 KRT35Q92764 455 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 LRRC1Q9BTT6 524 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 SNX25Q9H3E2 840 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 NSUN3Q9H649 340 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 SYNCQ9H7C4 482 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 TBC1D13Q9NVG8 400 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 KANSL3Q9P2N6 904 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 THEGQ9P2T0 379 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 TSPAN16Q9UKR8 245 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 KRIT1O00522 736 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 SPTLC1O15269 473 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 FGGP02679 453 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 SETSIPP0DME0 302 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 DNAJB1P25685 340 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 RPL9P32969 192 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PPM1AP35813 382 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 GNL1P36915 607 aaPredicted RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PBX3P40426 434 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 GABRB2P47870 512 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 KRT17Q04695 432 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 UBE3AQ05086 875 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PDCLQ13371 301 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 CAMK1Q14012 370 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PPP2R5EQ16537 467 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 LONRF2Q1L5Z9 754 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 PPP1R15BQ5SWA1 713 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 ARHGAP17Q68EM7 881 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 ACOT1Q86TX2 421 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 CRYBG2Q8N1P7 616 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 IPO4Q8TEX9 1081 aaKnown RBP15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 ARFGAP3Q9NP61 516 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 SPG21Q9NZD8 308 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 CYTH4Q9UIA0 394 aa15.38■□□□□ 0.05
POLR2J3-204ENST00000486319 REV3LO60673 3130 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 SPTBN5Q9NRC6 3674 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 GOLGA6L10A0A0M3HER8 536 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 SIGLEC16A6NMB1 481 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 PSTPIP1O43586 416 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 POMCP01189 267 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 WARSP23381 471 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 AFF1P51825 1210 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 BCAR1P56945 870 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 SNX16P57768 344 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 PSMC1P62191 440 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 VSNL1P62760 191 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 PLCB3Q01970 1234 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 PIGHQ14442 188 aaPredicted RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 GOLGA7BQ2TAP0 167 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 TCEAL5Q5H9L2 206 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 CYP4A22Q5TCH4 519 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 CC2D1AQ6P1N0 951 aaPredicted RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 RHOT1Q8IXI2 618 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 ADGRF2Q8IZF7 708 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 MICAL1Q8TDZ2 1067 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 ATXN2LQ8WWM7 1075 aaKnown RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 HLA-CQ95604 372 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 TNIP3Q96KP6 325 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 FAM193BQ96PV7 902 aaPredicted RBP15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 CPXM1Q96SM3 734 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 KRT12Q99456 494 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 TRIM7Q9C029 511 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 NRDE2Q9H7Z3 1164 aa15.37■□□□□ 0.05
POLR2J3-204ENST00000486319 HESX1Q9UBX0 185 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 340 ms