RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 FAM49BQ9NUQ9 324 aa18.77■□□□□ 0.6
COL6A1-204ENST00000486023 TMEM30AQ9NV96 361 aa18.77■□□□□ 0.6
COL6A1-204ENST00000486023 ZMYM5Q9UJ78 669 aa18.77■□□□□ 0.6
COL6A1-204ENST00000486023 MAN1B1Q9UKM7 699 aa18.77■□□□□ 0.6
COL6A1-204ENST00000486023 CIZ1Q9ULV3 898 aaPredicted RBP18.77■□□□□ 0.6
COL6A1-204ENST00000486023 R4GN57 208 aa18.77■□□□□ 0.6
COL6A1-204ENST00000486023 ATP8B3O60423 1300 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 SPECC1L-ADORA2AF8WAN1 911 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 ADORA2BP29275 332 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 WEE1P30291 646 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 ASPAP45381 313 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 NOP14P78316 857 aaKnown RBP18.76■□□□□ 0.59
COL6A1-204ENST00000486023 CSTF1Q05048 431 aaKnown RBP18.76■□□□□ 0.59
COL6A1-204ENST00000486023 TAF10Q12962 218 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 KRT39Q6A163 491 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 FAM35AQ86V20 835 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 ADSSL1Q8N142 457 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 SLC2A14Q8TDB8 520 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 JAKMIP2Q96AA8 810 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 C8orf33Q9H7E9 229 aaPredicted RBP18.76■□□□□ 0.59
COL6A1-204ENST00000486023 EHD2Q9NZN4 543 aa18.76■□□□□ 0.59
COL6A1-204ENST00000486023 CHORDC1Q9UHD1 332 aaPredicted RBP18.76■□□□□ 0.59
COL6A1-204ENST00000486023 CACNA1HO95180 2353 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 GFRA3O60609 400 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 AP1G2O75843 785 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 SP9P0CG40 484 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 ARSAP15289 507 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 MXI1P50539 228 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 FKBP3Q00688 224 aaKnown RBP18.75■□□□□ 0.59
COL6A1-204ENST00000486023 PLCB2Q00722 1185 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 PON2Q15165 354 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 TSSK4Q6SA08 328 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 NUP93Q8N1F7 819 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 SPATA20Q8TB22 786 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 SEMA4DQ92854 862 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 KRT82Q9NSB4 513 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 CHMP5Q9NZZ3 219 aa18.75■□□□□ 0.59
COL6A1-204ENST00000486023 PSMA7O14818 248 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 STX10O60499 249 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
COL6A1-204ENST00000486023 TRIM21P19474 475 aaKnown RBP18.74■□□□□ 0.59
COL6A1-204ENST00000486023 YWHAQP27348 245 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 MAP3K7CLP57077 242 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 MTAPQ13126 283 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 RUNX3Q13761 415 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 CAMK4Q16566 473 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 ITPRIPL2Q3MIP1 535 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 TXNDC11Q6PKC3 985 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 PAQR9Q6ZVX9 377 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 FUKQ8N0W3 1084 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 SCAMP5Q8TAC9 235 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 RIN3Q8TB24 985 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 SH3RF2Q8TEC5 729 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 FBXO32Q969P5 355 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 CLDN23Q96B33 292 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 SMARCD1Q96GM5 515 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 SLITRK1Q96PX8 696 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 TWNKQ96RR1 684 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 NIF3L1Q9GZT8 377 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 KIF9Q9HAQ2 790 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
COL6A1-204ENST00000486023 RBM12Q9NTZ6 932 aaKnown RBP18.74■□□□□ 0.59
COL6A1-204ENST00000486023 RAB20Q9NX57 234 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 SMPD4Q9NXE4 827 aa18.74■□□□□ 0.59
COL6A1-204ENST00000486023 PIEZO1Q92508 2521 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 ZNF840PA6NDX5 716 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 SCAMP3O14828 347 aaKnown RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 GTF2H1P32780 548 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 CTHP32929 405 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 NBL1P41271 181 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 FZD5Q13467 585 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 MTF1Q14872 753 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 WDR44Q5JSH3 913 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 UNC93AQ86WB7 457 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 RALGPS2Q86X27 583 aaPredicted RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 FBXL13Q8NEE6 735 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 NKD2Q969F2 451 aaPredicted RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 CEP295NLQ96MC4 621 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 NT5C1AQ9BXI3 368 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 GTPBP4Q9BZE4 634 aaKnown RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 DUS2Q9NX74 493 aaKnown RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 GCNT4Q9P109 453 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
COL6A1-204ENST00000486023 CTNND2Q9UQB3 1225 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 WNT6Q9Y6F9 365 aa18.73■□□□□ 0.59
COL6A1-204ENST00000486023 SOBPA7XYQ1 873 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 SLC16A3O15427 465 aaKnown RBP18.72■□□□□ 0.59
COL6A1-204ENST00000486023 BEST1O76090 585 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 RTN3O95197 1032 aaPredicted RBP18.72■□□□□ 0.59
COL6A1-204ENST00000486023 IFNAR2P48551 515 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 STX17P56962 302 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 LRRC63Q05C16 580 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 LRMPQ12912 555 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CCDC40Q4G0X9 1142 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CBWD6Q4V339 395 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 COBLL1Q53SF7 1204 aa18.72■□□□□ 0.59
COL6A1-204ENST00000486023 CBWD3Q5JTY5 395 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms