RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PPP3CCP48454 512 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 KPNA1P52294 538 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-205ENST00000485746 CACNA2D1P54289 1103 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
PTCD1-205ENST00000485746 USP46P62068 366 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 INCA1Q0VD86 236 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 KCNH2Q12809 1159 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 TAF10Q12962 218 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 UBXN2BQ14CS0 331 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 PHLDB3Q6NSJ2 640 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 TPRG1Q6ZUI0 275 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 TMEM150AQ86TG1 271 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 FUKQ8N0W3 1084 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 BPIFB1Q8TDL5 484 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 DNASE1L2Q92874 299 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 JAKMIP2Q96AA8 810 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 TMEM176AQ96HP8 235 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 KCNK16Q96T55 309 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 KCNH6Q9H252 994 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 HEBP1Q9NRV9 189 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 CISHQ9NSE2 258 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 TDP1Q9NUW8 608 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 OBP2AQ9NY56 170 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 MRPS17Q9Y2R5 130 aaKnown RBP13.27□□□□□ -0.29
PTCD1-205ENST00000485746 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 SIT1Q9Y3P8 196 aa13.27□□□□□ -0.29
PTCD1-205ENST00000485746 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 CHADO15335 359 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 P4HA2O15460 535 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 NPR3P17342 541 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 HDCP19113 662 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 TBXAS1P24557 533 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 WEE1P30291 646 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 MTIF2P46199 727 aaKnown RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 SLC8A3P57103 927 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 PLCB2Q00722 1185 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 CUL2Q13617 745 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 ARHGAP29Q52LW3 1261 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 IER5LQ5T953 404 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 CWF19L1Q69YN2 538 aaKnown RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 ZNF852Q6ZMS4 543 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 ARL14EPQ8N8R7 260 aaPredicted RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 TMEM105Q8N8V8 129 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 PDZD8Q8NEN9 1154 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 TTC8Q8TAM2 541 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 RSPRY1Q96DX4 576 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 CNOT6LQ96LI5 555 aaKnown RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 TWNKQ96RR1 684 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 CYP2S1Q96SQ9 504 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 HNRNPABQ99729 332 aaKnown RBP13.26□□□□□ -0.29
PTCD1-205ENST00000485746 KIF9Q9HAQ2 790 aa13.26□□□□□ -0.29
PTCD1-205ENST00000485746 KANSL1LA0AUZ9 987 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 C2orf78A6NCI8 922 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 FAM170BA6NMN3 283 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 MAN2B1O00754 1011 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 NCAM2O15394 837 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 PI15O43692 258 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 TADA3O75528 432 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 PRAMEF12O95522 483 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 DCNP07585 359 aaKnown RBP13.25□□□□□ -0.29
PTCD1-205ENST00000485746 CD19P15391 556 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 AOC1P19801 751 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 CD72P21854 359 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 SLC5A3P53794 718 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 STARD6P59095 220 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 PAQR9Q6ZVX9 377 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 FAM114A1Q8IWE2 563 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 TRIM59Q8IWR1 403 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 PPM1KQ8N3J5 372 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 EHBP1Q8NDI1 1231 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 WHAMMQ8TF30 809 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 USP13Q92995 863 aaPredicted RBP13.25□□□□□ -0.29
PTCD1-205ENST00000485746 ZFYVE19Q96K21 471 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 SMOQ99835 787 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 ARID3AQ99856 593 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 FOXQ1Q9C009 403 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 FBXO44Q9H4M3 255 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 GKN1Q9NS71 199 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 COMMD8Q9NX08 183 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 CHORDC1Q9UHD1 332 aaPredicted RBP13.25□□□□□ -0.29
PTCD1-205ENST00000485746 PCDHB4Q9Y5E5 795 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 NCOR1O75376 2440 aa13.25□□□□□ -0.29
PTCD1-205ENST00000485746 MYO10Q9HD67 2058 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 DOCK6Q96HP0 2047 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 ZNF840PA6NDX5 716 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 MBD3O95983 291 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 NUBP1P53384 320 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 PTPN5P54829 565 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 MARSP56192 900 aaKnown RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 FCHO2Q0JRZ9 810 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 DPCR1Q3MIW9 517 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 SGO2Q562F6 1265 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 PPP1R26Q5T8A7 1209 aaPredicted RBP13.24□□□□□ -0.29
PTCD1-205ENST00000485746 SASS6Q6UVJ0 657 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 SLC4A11Q8NBS3 891 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 SCAMP5Q8TAC9 235 aa13.24□□□□□ -0.29
PTCD1-205ENST00000485746 GPT2Q8TD30 523 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms