RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ARHGEF3Q9NR81 526 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 TRPM5Q9NZQ8 1165 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 OBSL1O75147 1896 aa20.3■□□□□ 0.84
SNX17-206ENST00000484886 TRIOO75962 3097 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 NUP210Q8TEM1 1887 aaPredicted RBP20.29■□□□□ 0.84
SNX17-206ENST00000484886 PMM2O15305 246 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 ABL1P00519 1130 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 COL9A1P20849 921 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 ERCC5P28715 1186 aaPredicted RBP20.29■□□□□ 0.84
SNX17-206ENST00000484886 GDI1P31150 447 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 MAP3K7CLP57077 242 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 CCDC183Q5T5S1 534 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 CMTM8Q8IZV2 173 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 NUP93Q8N1F7 819 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 PPM1KQ8N3J5 372 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 DEPDC1BQ8WUY9 529 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 TMEM176AQ96HP8 235 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 HCN4Q9Y3Q4 1203 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 GREB1Q4ZG55 1949 aa20.29■□□□□ 0.84
SNX17-206ENST00000484886 DENND4CQ5VZ89 1909 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 ZNF263O14978 683 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 TADA3O75528 432 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
SNX17-206ENST00000484886 PRAMEF12O95522 483 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 YWHAQP27348 245 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 HSP90AA4PQ58FG1 418 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 MON1AQ86VX9 555 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 MFSD6LQ8IWD5 586 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 TTC16Q8NEE8 873 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 FBXO32Q969P5 355 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 RSPRY1Q96DX4 576 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 SLITRK1Q96PX8 696 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 HNRNPABQ99729 332 aaKnown RBP20.28■□□□□ 0.84
SNX17-206ENST00000484886 SMOQ99835 787 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 INTS2Q9H0H0 1204 aaKnown RBP20.28■□□□□ 0.84
SNX17-206ENST00000484886 THAP9Q9H5L6 903 aa20.28■□□□□ 0.84
SNX17-206ENST00000484886 ZNF638Q14966 1978 aaKnown RBP20.28■□□□□ 0.84
SNX17-206ENST00000484886 TRAV19A0A0A6YYK7 116 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 KRBA1A5PL33 1030 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 CKMP06732 381 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 SLC5A3P53794 718 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 RAD23BP54727 409 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 TAF10Q12962 218 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 CELF5Q8N6W0 485 aaKnown RBP20.27■□□□□ 0.84
SNX17-206ENST00000484886 SLC4A11Q8NBS3 891 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 EHBP1Q8NDI1 1231 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 IRF7Q92985 503 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 TTLL2Q9BWV7 592 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 FAM124BQ9H5Z6 455 aaPredicted RBP20.27■□□□□ 0.84
SNX17-206ENST00000484886 GCNT4Q9P109 453 aa20.27■□□□□ 0.84
SNX17-206ENST00000484886 NCANO14594 1321 aa20.27■□□□□ 0.83
SNX17-206ENST00000484886 USP17L7P0C7H9 530 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 CD19P15391 556 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 MLF2Q15773 248 aaPredicted RBP20.26■□□□□ 0.83
SNX17-206ENST00000484886 SLC44A4Q53GD3 710 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 CT47A1Q5JQC4 288 aaPredicted RBP20.26■□□□□ 0.83
SNX17-206ENST00000484886 PPP1R26Q5T8A7 1209 aaPredicted RBP20.26■□□□□ 0.83
SNX17-206ENST00000484886 RBM43Q6ZSC3 357 aaKnown RBP20.26■□□□□ 0.83
SNX17-206ENST00000484886 RRAGAQ7L523 313 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 SCAMP5Q8TAC9 235 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 SHDQ96IW2 340 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 TBC1D17Q9HA65 648 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 PCDHB4Q9Y5E5 795 aa20.26■□□□□ 0.83
SNX17-206ENST00000484886 C2orf78A6NCI8 922 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 SOBPA7XYQ1 873 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 PES1O00541 588 aaKnown RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 BEST1O76090 585 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 PRKCSHP14314 528 aaPredicted RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 WEE1P30291 646 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 PPP3CCP48454 512 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 PDE6CP51160 858 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 VCPP55072 806 aaKnown RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 STX1AQ16623 288 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 ASTLQ6HA08 431 aaPredicted RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 TMEM270Q6UE05 265 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 CLEC20AQ6ZU45 233 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 IRF2BP1Q8IU81 584 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 ARHGEF19Q8IW93 802 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 ARL14EPQ8N8R7 260 aaPredicted RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 LMO3Q8TAP4 145 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 BPIFB1Q8TDL5 484 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 CSGALNACT1Q8TDX6 532 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 DNASE1L2Q92874 299 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 CYP2S1Q96SQ9 504 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 CRACR2AQ9BSW2 395 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 TDP1Q9NUW8 608 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 ANO10Q9NW15 660 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 THG1LQ9NWX6 298 aaKnown RBP20.25■□□□□ 0.83
SNX17-206ENST00000484886 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 RAPGEFL1Q9UHV5 662 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 CCL26Q9Y258 94 aa20.25■□□□□ 0.83
SNX17-206ENST00000484886 NPR3P17342 541 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 SLC8A3P57103 927 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 SGO2Q562F6 1265 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 GBP6Q6ZN66 633 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 ZMIZ2Q8NF64 920 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 KAT5Q92993 513 aa20.24■□□□□ 0.83
SNX17-206ENST00000484886 USP13Q92995 863 aaPredicted RBP20.24■□□□□ 0.83
SNX17-206ENST00000484886 KIF9Q9HAQ2 790 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms