RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TNIP3Q96KP6 325 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 CYP2S1Q96SQ9 504 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 KCNK16Q96T55 309 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 DDX23Q9BUQ8 820 aaKnown RBP13.06□□□□□ -0.32
MSH5-216ENST00000484309 BCO2Q9BYV7 579 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 NIF3L1Q9GZT8 377 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 KRT82Q9NSB4 513 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
MSH5-216ENST00000484309 FAM170BA6NMN3 283 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 ARNTLO00327 626 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CHADO15335 359 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 AP1G2O75843 785 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 ABL1P00519 1130 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CKMP06732 381 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 DDX6P26196 483 aaKnown RBP eCLIP13.05□□□□□ -0.32
MSH5-216ENST00000484309 ADORA2BP29275 332 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 ENPEPQ07075 957 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 TNK2Q07912 1038 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CCDC40Q4G0X9 1142 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CBWD6Q4V339 395 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CBWD3Q5JTY5 395 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CBWD5Q5RIA9 395 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 FUKQ8N0W3 1084 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CELF5Q8N6W0 485 aaKnown RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 C12orf29Q8N999 325 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 CCDC150Q8NCX0 1101 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 SLC2A14Q8TDB8 520 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 JAKMIP2Q96AA8 810 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 C8orf48Q96LL4 319 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 ARID3AQ99856 593 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 DUSP9Q99956 384 aaKnown RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 GTPBP4Q9BZE4 634 aaKnown RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 GTSE1Q9NYZ3 720 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 DLGAP2Q9P1A6 1054 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 ARMCX3Q9UH62 379 aaPredicted RBP13.05□□□□□ -0.32
MSH5-216ENST00000484309 ATP8B3O60423 1300 aa13.05□□□□□ -0.32
MSH5-216ENST00000484309 KIAA1549LQ6ZVL6 1849 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 TRAV19A0A0A6YYK7 116 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 STX10O60499 249 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 BEST1O76090 585 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 WEE1P30291 646 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 GTF2H1P32780 548 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
MSH5-216ENST00000484309 NUBP1P53384 320 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 INCA1Q0VD86 236 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 ANGPT1Q15389 498 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 ZNF394Q53GI3 561 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 TRIM68Q6AZZ1 485 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 TTI2Q6NXR4 508 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 ZNF852Q6ZMS4 543 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 ALYREFQ86V81 257 aaKnown RBP13.04□□□□□ -0.32
MSH5-216ENST00000484309 WHAMMQ8TF30 809 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 TATDN2Q93075 761 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 SLC35C1Q96A29 364 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 SMARCD1Q96GM5 515 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 DMAP1Q9NPF5 467 aaPredicted RBP13.04□□□□□ -0.32
MSH5-216ENST00000484309 TDP1Q9NUW8 608 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 RAB20Q9NX57 234 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 OBP2AQ9NY56 170 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 TRPM5Q9NZQ8 1165 aa13.04□□□□□ -0.32
MSH5-216ENST00000484309 CILPO75339 1184 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 USP17L7P0C7H9 530 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 MCCD1P59942 119 aaPredicted RBP13.03□□□□□ -0.32
MSH5-216ENST00000484309 LRMPQ12912 555 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 TAF10Q12962 218 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 PAK1Q13153 545 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 NUP93Q8N1F7 819 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 CRYBG2Q8N1P7 616 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 ZMIZ2Q8NF64 920 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 SCAMP5Q8TAC9 235 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 FAM3CQ92520 227 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 SMOQ99835 787 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 TTLL2Q9BWV7 592 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 CYP3A43Q9HB55 503 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 GKN1Q9NS71 199 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 GCNT4Q9P109 453 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 ZMYM5Q9UJ78 669 aa13.03□□□□□ -0.32
MSH5-216ENST00000484309 SCAMP3O14828 347 aaKnown RBP13.02□□□□□ -0.33
MSH5-216ENST00000484309 ARSAP15289 507 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 HDCP19113 662 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 YWHAQP27348 245 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 PPP1R2P41236 205 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 SLC5A3P53794 718 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 MAP3K7CLP57077 242 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 WDR44Q5JSH3 913 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 TXNDC11Q6PKC3 985 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 FBXO32Q969P5 355 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 CEP295NLQ96MC4 621 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 CEP63Q96MT8 703 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 SLITRK1Q96PX8 696 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 EBF3Q9H4W6 596 aa13.02□□□□□ -0.33
MSH5-216ENST00000484309 KIF9Q9HAQ2 790 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms