RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 BUD23O43709 281 aaKnown RBP20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 EXTL3O43909 919 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 ITGBL1O95965 494 aaPredicted RBP20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 EIF2AK2P19525 551 aaKnown RBP20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 BST1Q10588 318 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 ZBTB41Q5SVQ8 909 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 DNAJC24Q6P3W2 148 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 SESTD1Q86VW0 696 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 PDIK1LQ8N165 341 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 ARFGAP1Q8N6T3 406 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 SMC1BQ8NDV3 1235 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 B4GALNT2Q8NHY0 566 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 NCSTNQ92542 709 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 MASTLQ96GX5 879 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 SRPK1Q96SB4 655 aaKnown RBP20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 HAPLN2Q9GZV7 340 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 EBF3Q9H4W6 596 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 STK32BQ9NY57 414 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 KCNK4Q9NYG8 393 aa20.64■□□□□ 0.89
RPUSD3-216ENST00000484134 KLF11O14901 512 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 IL1R2P27930 398 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ZNF200P98182 395 aaPredicted RBP20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 TRMT5Q32P41 509 aaKnown RBP20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 TBC1D25Q3MII6 688 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 RAPH1Q70E73 1250 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ARHGAP22Q7Z5H3 698 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ARID3BQ8IVW6 561 aaPredicted RBP20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 FAM71DQ8N9W8 422 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ZWILCHQ9H900 591 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 NDE1Q9NXR1 346 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 KBTBD13C9JR72 458 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 NDC80O14777 642 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ZNF862O60290 1169 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 ENTPD3O75355 529 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 CD48P09326 243 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 LIN52Q52LA3 116 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 CYP4A22Q5TCH4 519 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 STRIP1Q5VSL9 837 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 RSAD2Q8WXG1 361 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 C20orf27Q9GZN8 174 aa20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 MARCOQ9UEW3 520 aaPredicted RBP20.63■□□□□ 0.89
RPUSD3-216ENST00000484134 CYB561D2O14569 222 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 AVILO75366 819 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 KITP10721 976 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 DYNC1I2Q13409 638 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 ZBTB45Q96K62 511 aaPredicted RBP20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 CEP170P1Q96L14 293 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 TAAR1Q96RJ0 339 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 DDX56Q9NY93 547 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 SERPINA10Q9UK55 444 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 AGTPBP1Q9UPW5 1226 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 TBC1D30Q9Y2I9 924 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 TELO2Q9Y4R8 837 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 CCDC195A0A1B0GUA6 201 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 INHBAP08476 426 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 ETS2P15036 469 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 AP2B1P63010 937 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 BASP1P80723 227 aaKnown RBP20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 ENPEPQ07075 957 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 C1orf146Q5VVC0 180 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 RNF111Q6ZNA4 994 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 WDTC1Q8N5D0 677 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 OR5B17Q8NGF7 314 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 ACAP3Q96P50 834 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 CCDC106Q9BWC9 280 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 XPNPEP1Q9NQW7 623 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 TAGLN3Q9UI15 199 aa20.62■□□□□ 0.89
RPUSD3-216ENST00000484134 PRR5-ARHGAP8B1AHC4 643 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 WDR64B1ANS9 1081 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 C1QAP02745 245 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 MYCLP12524 364 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 CDK7P50613 346 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 ARHGAP8P85298 464 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 VPS72Q15906 364 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 NDNQ99608 321 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 PPME1Q9Y570 386 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 IKBKGQ9Y6K9 419 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 RGPD3A6NKT7 1758 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 RGPD4Q7Z3J3 1758 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 TRIM49D1C9J1S8 452 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 SPECC1L-ADORA2AF8WAN1 911 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 COPEO14579 308 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 CIB2O75838 187 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 SPATA31D3P0C874 917 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 BRD2P25440 801 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 ZNF132P52740 706 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 ALDH18A1P54886 795 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 AQP5P55064 265 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 MRPS5P82675 430 aaKnown RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 PIGHQ14442 188 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 ARMC3Q5W041 872 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 SPATA31D4Q6ZUB0 917 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 SYTL5Q8TDW5 730 aaPredicted RBP20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 MTBPQ96DY7 904 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 HOMER2Q9NSB8 354 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 TEX264Q9Y6I9 313 aa20.61■□□□□ 0.89
RPUSD3-216ENST00000484134 UBR3Q6ZT12 1888 aa20.6■□□□□ 0.89
RPUSD3-216ENST00000484134 MEI4A8MW99 385 aa20.6■□□□□ 0.89
RPUSD3-216ENST00000484134 TCP10L2B9ZVM9 353 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms