RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 TRIM54Q9BYV2 358 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 C22orf23Q9BZE7 217 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 DPH1Q9BZG8 443 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 DHX36Q9H2U1 1008 aaKnown RBP3.54□□□□□ -1.84
PKP4-212ENST00000483881 FAM83DQ9H4H8 585 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 CXorf56Q9H5V9 222 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 ZMAT3Q9HA38 289 aaKnown RBP3.54□□□□□ -1.84
PKP4-212ENST00000483881 ARFGAP3Q9NP61 516 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 XPNPEP3Q9NQH7 507 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 KLHL11Q9NVR0 708 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 TBCCD1Q9NVR7 557 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 FBXO34Q9NWN3 711 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 REXO2Q9Y3B8 237 aaKnown RBP3.54□□□□□ -1.84
PKP4-212ENST00000483881 PPRC1Q5VV67 1664 aaKnown RBP3.54□□□□□ -1.84
PKP4-212ENST00000483881 MADDQ8WXG6 1647 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 TEX14Q8IWB6 1497 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 RAD54L2Q9Y4B4 1467 aa3.54□□□□□ -1.84
PKP4-212ENST00000483881 KIF16BQ96L93 1317 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 SETD1BQ9UPS6 1966 aaKnown RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 TRANK1O15050 2925 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PRAMEF33A0A0G2JMD5 474 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 A0A1W2PS29 197 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 TMEM191CA6NGB0 347 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 AREL1O15033 823 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CTAGE5O15320 804 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CCP110O43303 1012 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PRAMEF10O60809 474 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CFIP05156 583 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CCDC172P0C7W6 258 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 KLRC1P26715 233 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CD38P28907 300 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 APOBEC3AP31941 199 aaPredicted RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 MAN1A1P33908 653 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 AVPR1BP47901 424 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 TRPC1P48995 793 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 ANXA11P50995 505 aaKnown RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 ZNF135P52742 658 aaPredicted RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 GRM1Q13255 1194 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 DYRK1AQ13627 763 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 DAG1Q14118 895 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 E2F2Q14209 437 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PTPAQ15257 358 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PREPLQ4J6C6 727 aaPredicted RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 TMEM63BQ5T3F8 832 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 TEDDM1Q5T9Z0 273 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 APOA5Q6Q788 366 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 USP17L6PQ6QN14 398 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 Q6ZRM9 215 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 ZSCAN30Q86W11 494 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 KRT73Q86Y46 540 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 ZNF276Q8N554 614 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PLBD2Q8NHP8 589 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 SPATA3Q8NHX4 192 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 POC1BQ8TC44 478 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 SLC9A6Q92581 669 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 RAB24Q969Q5 203 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 MARS2Q96GW9 593 aaKnown RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 MRGPRX1Q96LB2 322 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 PPP1R9BQ96SB3 815 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 OSBPL9Q96SU4 736 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 SPATA5L1Q9BVQ7 753 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CPEB1Q9BZB8 566 aaKnown RBP3.53□□□□□ -1.84
PKP4-212ENST00000483881 BHMT2Q9H2M3 363 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 AKIP1Q9NQ31 210 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 CASS4Q9NQ75 786 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 SACM1LQ9NTJ5 587 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 XPR1Q9UBH6 696 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 ZNHIT2Q9UHR6 403 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 FAM50BQ9Y247 325 aa3.53□□□□□ -1.84
PKP4-212ENST00000483881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.53□□□□□ -1.84
PKP4-212ENST00000483881 BCORL1Q5H9F3 1711 aa3.53□□□□□ -1.85
PKP4-212ENST00000483881 VPS8Q8N3P4 1428 aa3.53□□□□□ -1.85
PKP4-212ENST00000483881 CCDC151A5D8V7 595 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 AQP7P3A6NL99 342 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 F5H697 171 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 PMM2O15305 246 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 KIF1CO43896 1103 aaKnown RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 CDKL5O76039 1030 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 LETM1O95202 739 aaPredicted RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 ABHD16AO95870 558 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 AHSGP02765 367 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 TPM2P07951 284 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 PARP1P09874 1014 aaKnown RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 SBK3P0C264 359 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 PIM1P11309 404 aaPredicted RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 CAPN2P17655 700 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 HDCP19113 662 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 CD53P19397 219 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 DDX6P26196 483 aaKnown RBP eCLIP3.52□□□□□ -1.85
PKP4-212ENST00000483881 HTR3AP46098 478 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 CLK1P49759 484 aaKnown RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 LOXL3P58215 753 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 NXPH1P58417 271 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 GUCY1B3Q02153 619 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 EXOSC9Q06265 439 aaKnown RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 CTBP1Q13363 440 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 TOB2Q14106 344 aaPredicted RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 SLC29A2Q14542 456 aa3.52□□□□□ -1.85
PKP4-212ENST00000483881 DHX8Q14562 1220 aaKnown RBP3.52□□□□□ -1.85
PKP4-212ENST00000483881 MAPRE1Q15691 268 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms