RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 CEP85Q6P2H3 762 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 EPM2AIP1Q7L775 607 aaPredicted RBP4.57□□□□□ -1.68
GTF3A-207ENST00000482655 DTX2Q86UW9 622 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.57□□□□□ -1.68
GTF3A-207ENST00000482655 DIS3LQ8TF46 1054 aaKnown RBP4.57□□□□□ -1.68
GTF3A-207ENST00000482655 TBC1D5Q92609 795 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 PTDSS2Q9BVG9 487 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 SLC12A5Q9H2X9 1139 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 SERHLQ9NQF3 203 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 C1orf112Q9NSG2 853 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 PIH1D1Q9NWS0 290 aaKnown RBP4.57□□□□□ -1.68
GTF3A-207ENST00000482655 TMX2Q9Y320 296 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.57□□□□□ -1.68
GTF3A-207ENST00000482655 PCSK5Q92824 1860 aa4.57□□□□□ -1.68
GTF3A-207ENST00000482655 COL11A2P13942 1736 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-207ENST00000482655 LINC01548A6NM66 108 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 DCLK1O15075 740 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 ONECUT2O95948 504 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 FAM163BP0C2L3 166 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 HTR1BP28222 390 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 CLCN2P51788 898 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 RHBDL3P58872 404 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 FOXF2Q12947 444 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 E2F2Q14209 437 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 TMEM119Q4V9L6 283 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 TREML2Q5T2D2 321 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 RGS7BPQ6MZT1 257 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-207ENST00000482655 ANKRD16Q6P6B7 361 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 LRRC71Q8N4P6 559 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 CELF5Q8N6W0 485 aaKnown RBP4.56□□□□□ -1.68
GTF3A-207ENST00000482655 FANCBQ8NB91 859 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 SLC35G2Q8TBE7 412 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 MYH16Q9H6N6 1097 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 FAM204AQ9H8W3 233 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 GLOD4Q9HC38 313 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 ANLNQ9NQW6 1124 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 SH3BP4Q9P0V3 963 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 STAP2Q9UGK3 403 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 CCNL1Q9UK58 526 aaPredicted RBP4.56□□□□□ -1.68
GTF3A-207ENST00000482655 SH2B3Q9UQQ2 575 aa4.56□□□□□ -1.68
GTF3A-207ENST00000482655 CARMIL1Q5VZK9 1371 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 FRMPD2Q68DX3 1309 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 ABCA9Q8IUA7 1624 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 TARM1B6A8C7 271 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 H3BML4 177 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 TPD52L2O43399 206 aaKnown RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 JTBO76095 146 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 IL6RP08887 468 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 CYP2C9P11712 490 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 XRCC6P12956 609 aaKnown RBP eCLIP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 PCSK6P29122 969 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 CYP2C18P33260 490 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 PDE1AP54750 535 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 EEFSECP57772 596 aaKnown RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 GRM1Q13255 1194 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 PICALMQ13492 652 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 GBX1Q14549 363 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 LLGL1Q15334 1064 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 AARS2Q5JTZ9 985 aaKnown RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 GORABQ5T7V8 394 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 MAVSQ7Z434 540 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 WDR53Q7Z5U6 358 aaPredicted RBP4.55□□□□□ -1.68
GTF3A-207ENST00000482655 PLBD2Q8NHP8 589 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 PPP1R35Q8TAP8 253 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 MORC4Q8TE76 937 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 ATG4AQ8WYN0 398 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 SLC29A3Q9BZD2 475 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 XPR1Q9UBH6 696 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 RICTORQ6R327 1708 aa4.55□□□□□ -1.68
GTF3A-207ENST00000482655 AOX1Q06278 1338 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 A0A088AWK7 358 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 A0A1W2PPL8 197 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 PLEKHD1A6NEE1 506 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 H0YIZ8 118 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 UBXN7O94888 489 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 THP07101 528 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 FESP07332 822 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 TRIM27P14373 513 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 JUPP14923 745 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 LRPAP1P30533 357 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 LIPAP38571 399 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 UCP3P55916 312 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 KRT17Q04695 432 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 EZH2Q15910 746 aaKnown RBP4.54□□□□□ -1.68
GTF3A-207ENST00000482655 SRSF7Q16629 238 aaKnown RBP eCLIP4.54□□□□□ -1.68
GTF3A-207ENST00000482655 MGAT5BQ3V5L5 792 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 LMBRD2Q68DH5 695 aaPredicted RBP4.54□□□□□ -1.68
GTF3A-207ENST00000482655 ZNF783Q6ZMS7 281 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 SRGAP1Q7Z6B7 1085 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 SLC15A3Q8IY34 581 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 SEMA6DQ8NFY4 1073 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 DDB2Q92466 427 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 RUNDC1Q96C34 613 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 RPS6KC1Q96S38 1066 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 P2RX7Q99572 595 aaKnown RBP4.54□□□□□ -1.68
GTF3A-207ENST00000482655 SARGQ9BW04 601 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 ZNF700Q9H0M5 742 aa4.54□□□□□ -1.68
GTF3A-207ENST00000482655 NDRG4Q9ULP0 352 aaKnown RBP4.54□□□□□ -1.68
GTF3A-207ENST00000482655 COMMD10Q9Y6G5 202 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms