RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	ST6GALNAC4	Q9H4F1	302 aa		9.26	□□□□□ -0.93
UBE2F-222	ENST00000482096	KIF9	Q9HAQ2	790 aa		9.26	□□□□□ -0.93
UBE2F-222	ENST00000482096	TDP1	Q9NUW8	608 aa		9.26	□□□□□ -0.93
UBE2F-222	ENST00000482096	DPP3	Q9NY33	737 aa		9.26	□□□□□ -0.93
UBE2F-222	ENST00000482096	CCL26	Q9Y258	94 aa		9.26	□□□□□ -0.93
UBE2F-222	ENST00000482096	KMT2B	Q9UMN6	2715 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	OTOL1	A6NHN0	477 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	FIGNL2	A6NMB9	653 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	TTLL8	A6PVC2	850 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	KPNA7	A9QM74	516 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	TISP43	B9A030	160 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	RPP40	O75818	363 aa	Known RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	AKAP3	O75969	853 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	EPN2	O95208	641 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	CSH1	P0DML2	217 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	CSH2	P0DML3	217 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	PLCG1	P19174	1290 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	AVPR1A	P37288	418 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	PXN	P49023	591 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	AMPD2	Q01433	879 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	BFSP1	Q12934	665 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	SF3A2	Q15428	464 aa	Known RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	ERICH6B	Q5W0A0	696 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	TRIM68	Q6AZZ1	485 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	KBTBD6	Q86V97	674 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	MON1A	Q86VX9	555 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	NT5DC4	Q86YG4	428 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	CAMKK1	Q8N5S9	505 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	MAB21L3	Q8N8X9	362 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	C12orf50	Q8NA57	414 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	RAD54L	Q92698	747 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	ZC3H10	Q96K80	434 aa	Known RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	ZHX3	Q9H4I2	956 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	EBF3	Q9H4W6	596 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	RXFP3	Q9NSD7	469 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	TMLHE	Q9NVH6	421 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	ABI2	Q9NYB9	513 aa	Predicted RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	AGO2	Q9UKV8	859 aa	Known RBP	9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	SLC8A2	Q9UPR5	921 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	PCDHB5	Q9Y5E4	795 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	PCDHGA5	Q9Y5G8	931 aa		9.25	□□□□□ -0.93
UBE2F-222	ENST00000482096	SDK1	Q7Z5N4	2213 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	NUP210	Q8TEM1	1887 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096		H3BQV1	296 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	TBCA	O75347	108 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	IL18RAP	O95256	599 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	EGF	P01133	1207 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	KRT18	P05783	430 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	CCDC192	P0DO97	292 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	ARSA	P15289	507 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	DRD1	P21728	446 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	GJB2	P29033	226 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	PML	P29590	882 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	DDIT3	P35638	169 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	LONP1	P36776	959 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	GALK1	P51570	392 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	SEC13	P55735	322 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	ZNF268	Q14587	947 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	KARS	Q15046	597 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	POSTN	Q15063	836 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	PDGFRL	Q15198	375 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	CCDC6	Q16204	474 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	NFE2	Q16621	373 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	SV2C	Q496J9	727 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	FBXO43	Q4G163	708 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	TXNDC8	Q6A555	127 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	CC2D1A	Q6P1N0	951 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	ZNF720	Q7Z2F6	126 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	EFCAB13	Q8IY85	973 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	TSEN2	Q8NCE0	465 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	RIN3	Q8TB24	985 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	RNF217	Q8TC41	542 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	LEO1	Q8WVC0	666 aa	Predicted RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	LARP4B	Q92615	738 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	MRPS31	Q92665	395 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	CHAMP1	Q96JM3	812 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	FBRSL1	Q9HCM7	1045 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	HRH3	Q9Y5N1	445 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	CNOT1	A5YKK6	2376 aa	Known RBP	9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	MYH11	P35749	1972 aa		9.24	□□□□□ -0.93
UBE2F-222	ENST00000482096	PRPF40A	O75400	957 aa	Known RBP	9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	TADA3	O75528	432 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	NOL4	O94818	638 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	BMP15	O95972	392 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	ADSS	P30520	456 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	GJA4	P35212	333 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	PNPLA4	P41247	253 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	GPR15	P49685	360 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	RPL10A	P62906	217 aa	Known RBP	9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	SHC2	P98077	582 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	TSPY1	Q01534	308 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	CENPC	Q03188	943 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	GRIN1	Q05586	938 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	FAM160A1	Q05DH4	1040 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	RABEP1	Q15276	862 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	PLK5	Q496M5	336 aa		9.23	□□□□□ -0.93
UBE2F-222	ENST00000482096	STPG1	Q5TH74	334 aa		9.23	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms