RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 LAMA5O15230 3695 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 TCRBV21S2A2A0A5A6 115 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 PCNX2A6NKB5 2137 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 ANKRD63C9JTQ0 380 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 HUS1O60921 280 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 KAT7O95251 611 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 CYP17A1P05093 508 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 RPL6Q02878 288 aaKnown RBP14.34□□□□□ -0.11
NDC1-202ENST00000480952 DHX8Q14562 1220 aaKnown RBP14.34□□□□□ -0.11
NDC1-202ENST00000480952 DHCR24Q15392 516 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 TRIP6Q15654 476 aaKnown RBP14.34□□□□□ -0.11
NDC1-202ENST00000480952 PEAR1Q5VY43 1037 aaPredicted RBP14.34□□□□□ -0.11
NDC1-202ENST00000480952 RABEPKQ7Z6M1 372 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 FILIP1Q7Z7B0 1213 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 GPBP1Q86WP2 473 aa14.34□□□□□ -0.11
NDC1-202ENST00000480952 CCDC86Q9H6F5 360 aaKnown RBP14.34□□□□□ -0.11
NDC1-202ENST00000480952 ZNF638Q14966 1978 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 EIF4E1BA6NMX2 242 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 ARHGAP33O14559 1287 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 SLC9A3R1O14745 358 aaPredicted RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 KRT18P05783 430 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 SYPP08247 313 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 CD59P13987 128 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 ABCD1P33897 745 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 HMGN5P82970 282 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 ZXDBP98169 803 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 ATP2C1P98194 919 aaPredicted RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 POU5F1Q01860 360 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 RESTQ13127 1097 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 CFAP221Q4G0U5 840 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 SLC36A4Q6YBV0 504 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 TMEM86AQ8N2M4 240 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 OR2I1PQ8NGU4 316 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 HNRNPLLQ8WVV9 542 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 CAPN10Q9HC96 672 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 ZDHHC4Q9NPG8 344 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 ARHGEF4Q9NR80 690 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.33□□□□□ -0.12
NDC1-202ENST00000480952 TRPM5Q9NZQ8 1165 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 L1RE1Q9UN81 338 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 LIMCH1Q9UPQ0 1083 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 AGAP1Q9UPQ3 857 aa14.33□□□□□ -0.12
NDC1-202ENST00000480952 TSC2P49815 1807 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 A0A0A0MRY4 1105 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 VWA3AA6NCI4 1184 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 TISP43B9A030 160 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 SH3BP5O60239 455 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 ADAM23O75077 832 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 IL18RAPO95256 599 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 PFKLP17858 780 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 POLR2BP30876 1174 aaKnown RBP14.32□□□□□ -0.12
NDC1-202ENST00000480952 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
NDC1-202ENST00000480952 GRIA2P42262 883 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 TNFRSF4P43489 277 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 KIR2DL1P43626 348 aaPredicted RBP14.32□□□□□ -0.12
NDC1-202ENST00000480952 LHX1P48742 406 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 ZNF131P52739 623 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 TFAMQ00059 246 aaKnown RBP14.32□□□□□ -0.12
NDC1-202ENST00000480952 GTF2BQ00403 316 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 ZNF33AQ06730 810 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 MESP2Q0VG99 397 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 TMEM119Q4V9L6 283 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 NT5DC4Q86YG4 428 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 FUBP3Q96I24 572 aaKnown RBP eCLIP14.32□□□□□ -0.12
NDC1-202ENST00000480952 CAMK1GQ96NX5 476 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 PKMYT1Q99640 499 aa14.32□□□□□ -0.12
NDC1-202ENST00000480952 DNAAF2Q9NVR5 837 aaKnown RBP14.32□□□□□ -0.12
NDC1-202ENST00000480952 LOC400499M0QZD8 3231 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 SCN1AP35498 2009 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 TBC1D3BA6NDS4 549 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 SCAMP3O14828 347 aaKnown RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 ZBTB24O43167 697 aaPredicted RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 TBCAO75347 108 aaKnown RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 ADH1CP00326 375 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 ABL1P00519 1130 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 ITGB3P05106 788 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 PCSK1P29120 753 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 GRIK1P39086 918 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 MAGEA11P43364 429 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 SLC7A9P82251 487 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 KDSRQ06136 332 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 SLC14A1Q13336 389 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 CCDC142Q17RM4 750 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 RHBDF2Q6PJF5 856 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 CRELD2Q6UXH1 353 aaPredicted RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 CCNI2Q6ZMN8 369 aaPredicted RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 C4orf50Q6ZRC1 276 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 C12orf40Q86WS4 652 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 KIAA1958Q8N8K9 716 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 PNPLA1Q8N8W4 532 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 CACTINQ8WUQ7 758 aaKnown RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 ADAMTS14Q8WXS8 1223 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 POMGNT1Q8WZA1 660 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 RNF38Q9H0F5 515 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 MAGEC2Q9UBF1 373 aaPredicted RBP14.31□□□□□ -0.12
NDC1-202ENST00000480952 SNX9Q9Y5X1 595 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 CPQQ9Y646 472 aa14.31□□□□□ -0.12
NDC1-202ENST00000480952 STYXL1Q9Y6J8 313 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms