RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 HSFX1Q9UBD0 423 aa5.94□□□□□ -1.46
UPF3B-203ENST00000478840 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.94□□□□□ -1.46
UPF3B-203ENST00000478840 HMX3A6NHT5 357 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 DIRC3C9JPN6 131 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 LAMTOR5O43504 91 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 USP1O94782 785 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SUN1O94901 812 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 MBD4O95243 580 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SPATA31D3P0C874 917 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 KCNA2P16389 499 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 CHRM3P20309 590 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 CNTFP26441 200 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 RABGGTBP53611 331 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ACTR2P61160 394 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 FOXL1Q12952 345 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 CUL4BQ13620 913 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 VMACQ2NL98 169 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ATPAF1Q5TC12 328 aaPredicted RBP5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ANKRD45Q5TZF3 282 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 TCERG1LQ5VWI1 586 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 NFRKBQ6P4R8 1299 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SPATA31D4Q6ZUB0 917 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 RAB11FIP2Q7L804 512 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ANKS1BQ7Z6G8 1248 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ANKRD35Q8N283 1001 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 MAELQ96JY0 434 aaKnown RBP5.93□□□□□ -1.46
UPF3B-203ENST00000478840 PHACTR3Q96KR7 559 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 OR14A2Q96R54 314 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SLC26A6Q9BXS9 759 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 ZCWPW1Q9H0M4 648 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SMOC2Q9H3U7 446 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 RNPEPQ9H4A4 650 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 CXorf36Q9H7Y0 433 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 SEPSECSQ9HD40 501 aaKnown RBP5.93□□□□□ -1.46
UPF3B-203ENST00000478840 TMEM160Q9NX00 188 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 DNAJB11Q9UBS4 358 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 DAPP1Q9UN19 280 aa5.93□□□□□ -1.46
UPF3B-203ENST00000478840 A0A1B0GTW7 788 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A18PA6NE21 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A16PA6NEW6 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A9PA6NNJ1 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A5PA8MXJ8 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 H0Y3Z8 333 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 RASAL1O95294 804 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A15PP0C7V4 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 FAM90A14PP0C7W9 464 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 XBP1P17861 261 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 HK1P19367 917 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 ELF1P32519 619 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 ANXA11P50995 505 aaKnown RBP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 SEC24CP53992 1094 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 PRKAA2P54646 552 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 BCAT1P54687 386 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 TIAL1Q01085 375 aaKnown RBP eCLIP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 NHLH2Q02577 135 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 GPS1Q13098 491 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 TTC22Q5TAA0 569 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 TSHZ3Q63HK5 1081 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 SFRP4Q6FHJ7 346 aaPredicted RBP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 TMEM108Q6UXF1 575 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 SLC30A10Q6XR72 485 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 BBS12Q6ZW61 710 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 PCYOX1LQ8NBM8 494 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 NSUN7Q8NE18 718 aaKnown RBP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 OR56A1Q8NGH5 318 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 MBD3L2Q8NHZ7 208 aaPredicted RBP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 ABHD5Q8WTS1 349 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 PPP2R3CQ969Q6 453 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 WDR24Q96S15 920 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 SLC38A3Q99624 504 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 G6PC2Q9NQR9 355 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 VPS45Q9NRW7 570 aa5.92□□□□□ -1.46
UPF3B-203ENST00000478840 NDRG4Q9ULP0 352 aaKnown RBP5.92□□□□□ -1.46
UPF3B-203ENST00000478840 A0A1W2PS29 197 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CCDC78A2IDD5 438 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 NPIPB6E9PJ23 425 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 hCG_1984214I3L0E3 225 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 LEFTY2O00292 366 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 SRGAP2O75044 1071 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CD4P01730 458 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 HLA-DOAP06340 250 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CSF1RP07333 972 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 LDHCP07864 332 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 SRGAP2BP0DMP2 458 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 ITGALP20701 1170 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CAPN3P20807 821 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 KLRK1P26718 216 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 MSX2P35548 267 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-203ENST00000478840 ZEB1P37275 1124 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CCR5P51681 352 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 FHL3Q13643 280 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 HLXQ14774 488 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-203ENST00000478840 PTCHD3Q3KNS1 767 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 CERCAMQ5T4B2 595 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 ZNF648Q5T619 568 aaPredicted RBP5.91□□□□□ -1.46
UPF3B-203ENST00000478840 MAP3K21Q5TCX8 1036 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 NT5DC1Q5TFE4 455 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 RINLQ6ZS11 566 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 SPARTQ8N0X7 666 aa5.91□□□□□ -1.46
UPF3B-203ENST00000478840 D2HGDHQ8N465 521 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms