RNA–Protein interactions for RNA: ENST00000478731.1

PSME4-207, Transcript of proteasome activator subunit 4, humanhuman

TSL 2

Gene PSME4, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-207ENST00000478731 DTX2Q86UW9 622 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 WDR75Q8IWA0 830 aaKnown RBP4.11□□□□□ -1.75
PSME4-207ENST00000478731 KRT78Q8N1N4 520 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 FAM156AQ8NDB6 213 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 ATRIPQ8WXE1 791 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 LRTOMTQ8WZ04 291 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 TBC1D5Q92609 795 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 ZBTB9Q96C00 473 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 NMD3Q96D46 503 aaKnown RBP4.11□□□□□ -1.75
PSME4-207ENST00000478731 MSLNLQ96KJ4 702 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 SLC46A1Q96NT5 459 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 MESP1Q9BRJ9 268 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 PTDSS2Q9BVG9 487 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 ZNF518BQ9C0D4 1074 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 BHMT2Q9H2M3 363 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 ARHGEF3Q9NR81 526 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 TPCN1Q9ULQ1 816 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 TMX2Q9Y320 296 aa4.11□□□□□ -1.75
PSME4-207ENST00000478731 TRIM43BA6NCK2 446 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 VPS4BO75351 444 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 MOSPD3O75425 235 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 FAM163BP0C2L3 166 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 KITP10721 976 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 PCSK6P29122 969 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 CD6P30203 668 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 LRPAP1P30533 357 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 SLC7A1P30825 629 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 ZNF134P52741 427 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 ETFDHQ16134 617 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 CNGA2Q16280 664 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 KIAA0753Q2KHM9 967 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 RBM20Q5T481 1227 aaKnown RBP4.1□□□□□ -1.75
PSME4-207ENST00000478731 SLC9A4Q6AI14 798 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 ANKRD16Q6P6B7 361 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 ZNF66Q6ZN08 573 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 CCDC149Q6ZUS6 474 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 COL23A1Q86Y22 540 aaPredicted RBP4.1□□□□□ -1.75
PSME4-207ENST00000478731 DNAJC5GQ8N7S2 189 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 MAML1Q92585 1016 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 TRIM43Q96BQ3 446 aaPredicted RBP4.1□□□□□ -1.75
PSME4-207ENST00000478731 FAM136AQ96C01 138 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 REPS1Q96D71 796 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 ZNF48Q96MX3 618 aaPredicted RBP4.1□□□□□ -1.75
PSME4-207ENST00000478731 LRRC27Q9C0I9 530 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 BTBD1Q9H0C5 482 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 A1CFQ9NQ94 594 aaKnown RBP4.1□□□□□ -1.75
PSME4-207ENST00000478731 XPNPEP3Q9NQH7 507 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 SH3BP4Q9P0V3 963 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 DKK3Q9UBP4 350 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 SHOC2Q9UQ13 582 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 USP19O94966 1318 aa4.1□□□□□ -1.75
PSME4-207ENST00000478731 MBD3L4A6NDZ8 208 aaPredicted RBP4.09□□□□□ -1.75
PSME4-207ENST00000478731 MBD3L3A6NE82 208 aaPredicted RBP4.09□□□□□ -1.75
PSME4-207ENST00000478731 MYO1CO00159 1063 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 MGEA5O60502 916 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 JUPP14923 745 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 MPGP29372 298 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 FMO1Q01740 532 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 SLC13A2Q13183 592 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 CTBP1Q13363 440 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 RAB32Q13637 225 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 ICE2Q659A1 982 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 LAYNQ6UX15 382 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 TMEM108Q6UXF1 575 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 SLC29A4Q7RTT9 530 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 ZNF804AQ7Z570 1209 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 YTHDF3Q7Z739 585 aaKnown RBP4.09□□□□□ -1.75
PSME4-207ENST00000478731 MICU3Q86XE3 530 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 PCSK9Q8NBP7 692 aaKnown RBP4.09□□□□□ -1.75
PSME4-207ENST00000478731 DENND1AQ8TEH3 1009 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 STK32BQ9NY57 414 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 AFF4Q9UHB7 1163 aaKnown RBP4.09□□□□□ -1.75
PSME4-207ENST00000478731 TBC1D30Q9Y2I9 924 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 ZNF521Q96K83 1311 aa4.09□□□□□ -1.75
PSME4-207ENST00000478731 FOXN3O00409 490 aaPredicted RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 PPP6CO00743 305 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 HMGB1P09429 215 aaKnown RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 CHRM3P20309 590 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 PEX2P28328 305 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 PXNP49023 591 aaPredicted RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 ALDH9A1P49189 494 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 SUMO3P55854 103 aaPredicted RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 AARS2Q5JTZ9 985 aaKnown RBP4.08□□□□□ -1.76
PSME4-207ENST00000478731 ZNF618Q5T7W0 954 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 VPS53Q5VIR6 699 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 PRAMEF17Q5VTA0 474 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 SLC18B1Q6NT16 456 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 FANCBQ8NB91 859 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 SARGQ9BW04 601 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 NUP62CLQ9H1M0 184 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 CPNE7Q9UBL6 633 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 SH2B3Q9UQQ2 575 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 SSX2IPQ9Y2D8 614 aa4.08□□□□□ -1.76
PSME4-207ENST00000478731 TISP43B9A030 160 aa4.07□□□□□ -1.76
PSME4-207ENST00000478731 TRIM38O00635 465 aa4.07□□□□□ -1.76
PSME4-207ENST00000478731 ZNF213O14771 459 aa4.07□□□□□ -1.76
PSME4-207ENST00000478731 TLR5O60602 858 aa4.07□□□□□ -1.76
PSME4-207ENST00000478731 TUBB4AP04350 444 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms