RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 BIRC2Q13490 618 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 SLC39A12Q504Y0 691 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 ARHGAP15Q53QZ3 475 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 C18orf25Q96B23 403 aaPredicted RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 SCYL1Q96KG9 808 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 PKNOX2Q96KN3 472 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 TIAM2Q8IVF5 1701 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 SLC11A2P49281 568 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 TUFMP49411 452 aaKnown RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 TMED2Q15363 201 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 SLFN11Q7Z7L1 901 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 ZNF296Q8WUU4 475 aaPredicted RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 TRIB2Q92519 343 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 ARHGEF26Q96DR7 871 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 FAM118BQ9BPY3 351 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 RAB6BQ9NRW1 208 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 DPP7Q9UHL4 492 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 E5RJQ4 531 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 CST3P01034 146 aaPredicted RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 MT-ND3P03897 115 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 PMLP29590 882 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 GSPT2Q8IYD1 628 aaKnown RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 B3GALNT2Q8NCR0 500 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 C3orf20Q8ND61 904 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
PCCB-214ENST00000478469 RPRD1AQ96P16 312 aaPredicted RBP12.56□□□□□ -0.4
PCCB-214ENST00000478469 CNMDO75829 334 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 APRTP07741 180 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PAMP19021 973 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 EFEMP1Q12805 493 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PDK2Q15119 407 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 ANO4Q32M45 955 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 RABEP2Q9H5N1 569 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 GOLGA2P5Q9HBQ8 144 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 CDH9Q9ULB4 789 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 DNAJC25-GNG10A0A024R161 153 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PJA2O43164 708 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 CALCAP01258 141 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 CA4P22748 312 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 GJA9P57773 515 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PDIA2Q13087 525 aaKnown RBP12.55□□□□□ -0.4
PCCB-214ENST00000478469 TFDP3Q5H9I0 405 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 IL31Q6EBC2 164 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 CCDC121Q6ZUS5 278 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 NUDT18Q6ZVK8 323 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 IRF2BP2Q7Z5L9 587 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 C1orf127Q8N9H9 656 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 DBF4BQ8NFT6 615 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 EDEM1Q92611 657 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PTPN18Q99952 460 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 TRIM51Q9BSJ1 452 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 RRN3Q9NYV6 651 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 TUBGCP4Q9UGJ1 667 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 TLK1Q9UKI8 766 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 VEGFBP49765 207 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 CENPCQ03188 943 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PDCLQ13371 301 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 PAPD7Q5XG87 772 aaKnown RBP12.55□□□□□ -0.4
PCCB-214ENST00000478469 DENND1BQ6P3S1 775 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 HSFY1Q96LI6 401 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 KREMEN1Q96MU8 473 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 AGAP3Q96P47 875 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 MAGEB5Q9BZ81 275 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 TLR8Q9NR97 1041 aaKnown RBP12.55□□□□□ -0.4
PCCB-214ENST00000478469 CALCOCO1Q9P1Z2 691 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 ADGRA3Q8IWK6 1321 aa12.55□□□□□ -0.4
PCCB-214ENST00000478469 KLRC2P26717 231 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 ADCY2Q08462 1091 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 SLC10A6Q3KNW5 377 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 JAMLQ86YT9 394 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 EXD1Q8NHP7 514 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 GANCQ8TET4 914 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 AP4E1Q9UPM8 1137 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 SLC12A8A0AV02 714 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 ARVCFO00192 962 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 EFCAB14O75071 495 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 PIGRP01833 764 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 YWHAQP27348 245 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 SLC6A3Q01959 620 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 GHRHRQ02643 423 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 ADCY1Q08828 1119 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 P3H1Q32P28 736 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 C6orf118Q5T5N4 469 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 C6orf163Q5TEZ5 329 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 MEI1Q5TIA1 1274 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 GDAP1Q8TB36 358 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 SKA2Q8WVK7 121 aaPredicted RBP12.54□□□□□ -0.4
PCCB-214ENST00000478469 PCYT2Q99447 389 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 TRAIPQ9BWF2 469 aa12.54□□□□□ -0.4
PCCB-214ENST00000478469 INTS9Q9NV88 658 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms