RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 LCMT1Q9UIC8 334 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 FOXD3Q9UJU5 478 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 GGA2Q9UJY4 613 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NOCTQ9UK39 431 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 GTF3C4Q9UKN8 822 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TBX20Q9UMR3 447 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 AP4E1Q9UPM8 1137 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PCDHGB7Q9Y5F8 929 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ALG6Q9Y672 507 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NFS1Q9Y697 457 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NCOR1O75376 2440 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NFASCO94856 1347 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ANK1P16157 1881 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 A0A0G2JMZ2 1700 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 LRRC37A2A6NM11 1700 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 SSC5DA1L4H1 1573 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CCDC169A6NNP5 214 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 B8ZZF3 427 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TISP43B9A030 160 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ANKRD63C9JTQ0 380 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FZD9O00144 591 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 NDUFAB1O14561 156 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 KIAA0391O15091 583 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZC3H11AO75152 810 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 STAM2O75886 525 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 SGPL1O95470 568 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CPP00450 1065 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CYP11A1P05108 521 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CYP1A2P05177 515 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CTSHP09668 335 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CHRNB2P17787 502 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 GARTP22102 1010 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 MAOBP27338 520 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 DNAJA1P31689 397 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 LSP1P33241 339 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 USP8P40818 1118 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PDE6CP51160 858 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF280AP59817 542 aaPredicted RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PPP2R2AP63151 447 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FMO1Q01740 532 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CDR2Q01850 454 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CXCL9Q07325 125 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF844Q08AG5 666 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 SPP2Q13103 211 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PDCLQ13371 301 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TRADDQ15628 312 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 SNRNP35Q16560 246 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PTGISQ16647 500 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CYP1B1Q16678 543 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 UGCGQ16739 394 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 NBPF9Q3BBW0 867 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF394Q53GI3 561 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FAM102BQ5T8I3 360 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 DCAF15Q66K64 600 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PPP1R2P3Q6NXS1 205 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 NOP9Q86U38 636 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 HOOK3Q86VS8 718 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 DDX42Q86XP3 938 aaKnown RBP eCLIP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF677Q86XU0 584 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PALB2Q86YC2 1186 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 JAMLQ86YT9 394 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 WFDC3Q8IUB2 231 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 GPD1LQ8N335 351 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PPM1KQ8N3J5 372 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM161BQ8NDZ6 487 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FBXL13Q8NEE6 735 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF564Q8TBZ8 553 aaPredicted RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PARD3BQ8TEW8 1205 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ATP8B4Q8TF62 1192 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 UBLCP1Q8WVY7 318 aaPredicted RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 MAIP1Q8WWC4 291 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 DHX38Q92620 1227 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 KCNN1Q92952 543 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CD101Q93033 1021 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ARMC5Q96C12 935 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZNF653Q96CK0 615 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CDHR1Q96JP9 859 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 KREMEN1Q96MU8 473 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TEPSINQ96N21 525 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FRMD6Q96NE9 622 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 NTPCRQ9BSD7 190 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TRIM51Q9BSJ1 452 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 TXLNGYQ9BZA5 131 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CELF4Q9BZC1 486 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 NEUROG2Q9H2A3 272 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 DPH5Q9H2P9 285 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 RPAP3Q9H6T3 665 aaPredicted RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 CNOT10Q9H9A5 744 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 GBA2Q9HCG7 927 aaPredicted RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 KIAA1586Q9HCI6 787 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 C1GALT1Q9NS00 363 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 RNF146Q9NTX7 359 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ZDHHC18Q9NUE0 388 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 FAM105AQ9NUU6 356 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 MTRF1LQ9UGC7 380 aaKnown RBP5.26□□□□□ -1.57
SF3B6-202ENST00000478050 PCYOX1Q9UHG3 505 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 ADAMTS6Q9UKP5 1117 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 MTUS1Q9ULD2 1270 aa5.26□□□□□ -1.57
SF3B6-202ENST00000478050 COG5Q9UP83 839 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms