RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 TNNC1P63316 161 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 ZXDBP98169 803 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 MDH1BQ5I0G3 518 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 HS2ST1Q7LGA3 356 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 CACNA2D4Q7Z3S7 1137 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 XXYLT1Q8NBI6 393 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 OR6B3Q8NGW1 331 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 RPLP0P6Q8NHW5 317 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 MYCBPAPQ8TBZ2 947 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 CCDC127Q96BQ5 260 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 LOXL4Q96JB6 756 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 HHIPQ96QV1 700 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 TTLL2Q9BWV7 592 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 GZF1Q9H116 711 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-236ENST00000477477 SNX25Q9H3E2 840 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 POLR3BQ9NW08 1133 aaPredicted RBP12.13□□□□□ -0.47
HDLBP-236ENST00000477477 EHD2Q9NZN4 543 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 TRPM5Q9NZQ8 1165 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 ZNF840PA6NDX5 716 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 LEFTY2O00292 366 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 AXIN1O15169 862 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 POLR2DO15514 142 aaKnown RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 NFATC1O95644 943 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 STAU1O95793 577 aaKnown RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 OLFM2O95897 454 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 CCDC192P0DO97 292 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 CASP1P29466 404 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 GNL1P36915 607 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 RAP1GAPP47736 663 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 NR1H3Q13133 447 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 BMT2Q1RMZ1 405 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 WDR72Q3MJ13 1102 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 FOXD4L5Q5VV16 416 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 SYT13Q7L8C5 426 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 KBTBD6Q86V97 674 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 C12orf56Q8IXR9 622 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 FOXD4L4Q8WXT5 416 aaPredicted RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 ZNF516Q92618 1163 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 SNX21Q969T3 373 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 ACDQ96AP0 544 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 C8orf48Q96LL4 319 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 BLZF1Q9H2G9 400 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 ARRDC1-AS1Q9H2J1 176 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 LINC00597Q9H2U6 94 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 DPEP3Q9H4B8 488 aa12.12□□□□□ -0.47
HDLBP-236ENST00000477477 CGNQ9P2M7 1197 aaKnown RBP12.12□□□□□ -0.47
HDLBP-236ENST00000477477 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 APBB3O95704 486 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 ADRB1P08588 477 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 ZNF806P0C7X5 589 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 PTPN1P18031 435 aaKnown RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 PPP3CCP48454 512 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 CACNA2D1P54289 1103 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 MYL6P60660 151 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 SLC7A9P82251 487 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 TRPC3Q13507 836 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 DMC1Q14565 340 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 SF3A2Q15428 464 aaKnown RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 FOXD4L6Q3SYB3 417 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 AASDHQ4L235 1098 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 PPM1JQ5JR12 505 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 FOXD4L3Q6VB84 417 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 ZC3H10Q96K80 434 aaKnown RBP12.11□□□□□ -0.47
HDLBP-236ENST00000477477 ZNF518BQ9C0D4 1074 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 XYLT2Q9H1B5 865 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 SLC39A2Q9NP94 309 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 TMEM30AQ9NV96 361 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 PCDHGA5Q9Y5G8 931 aa12.11□□□□□ -0.47
HDLBP-236ENST00000477477 A8MXQ7 604 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 EXOC3O60645 756 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 F13A1P00488 732 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 OAS1P00973 400 aaKnown RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 ZSCAN22P10073 491 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PDIA4P13667 645 aaKnown RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 ATICP31939 592 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 OPRD1P41143 372 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 ME1P48163 572 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 LIMK1P53667 647 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 TAF10Q12962 218 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PSMD2Q13200 908 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CUL4BQ13620 913 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CCDC6Q16204 474 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 KNOP1Q1ED39 458 aaKnown RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 GAB4Q2WGN9 574 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PLK5Q496M5 336 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PLA2G2CQ5R387 149 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 TDRD10Q5VZ19 366 aaKnown RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 RESP18Q5W5W9 173 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 FILIP1Q7Z7B0 1213 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 C12orf50Q8NA57 414 aaPredicted RBP12.1□□□□□ -0.47
HDLBP-236ENST00000477477 B3GALNT2Q8NCR0 500 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CCDC26Q8TAB7 109 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 PLEKHO2Q8TD55 490 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CNTNAP3BQ96NU0 1288 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 B3GNT5Q9BYG0 378 aa12.1□□□□□ -0.47
HDLBP-236ENST00000477477 CNTNAP3Q9BZ76 1288 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms