RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PRKCQQ04759 706 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 INCA1Q0VD86 236 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 PHLDB3Q6NSJ2 640 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 CREBRFQ8IUR6 639 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 CRYBG2Q8N1P7 616 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 ARL14EPQ8N8R7 260 aaPredicted RBP16.99■□□□□ 0.31
ITGB1-210ENST00000474568 BPIFB1Q8TDL5 484 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 WHAMMQ8TF30 809 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 DNASE1L2Q92874 299 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
ITGB1-210ENST00000474568 FAM122AQ96E09 287 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 SMOQ99835 787 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 NUP62CLQ9H1M0 184 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 TRPM5Q9NZQ8 1165 aa16.99■□□□□ 0.31
ITGB1-210ENST00000474568 ZNF318Q5VUA4 2279 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 KANSL1LA0AUZ9 987 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 BEST1O76090 585 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 CKMP06732 381 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 SOX9P48436 509 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 FMO5P49326 533 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 MAP3K7CLP57077 242 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 TCF15Q12870 199 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 TAF10Q12962 218 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 NUP93Q8N1F7 819 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 CELF5Q8N6W0 485 aaKnown RBP16.98■□□□□ 0.31
ITGB1-210ENST00000474568 ZMIZ2Q8NF64 920 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 SCAMP5Q8TAC9 235 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 RIN3Q8TB24 985 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 CSGALNACT1Q8TDX6 532 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 GBP4Q96PP9 640 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 DMAP1Q9NPF5 467 aaPredicted RBP16.98■□□□□ 0.31
ITGB1-210ENST00000474568 CISHQ9NSE2 258 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 TDP1Q9NUW8 608 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 NDRG2Q9UN36 371 aaKnown RBP16.98■□□□□ 0.31
ITGB1-210ENST00000474568 SIT1Q9Y3P8 196 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 PIAS3Q9Y6X2 628 aa16.98■□□□□ 0.31
ITGB1-210ENST00000474568 TRAV19A0A0A6YYK7 116 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 FAM170BA6NMN3 283 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 H0Y858 1186 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 CHADO15335 359 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 GALR2O43603 387 aaPredicted RBP16.97■□□□□ 0.31
ITGB1-210ENST00000474568 FAM200BP0CF97 657 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 TRIM21P19474 475 aaKnown RBP16.97■□□□□ 0.31
ITGB1-210ENST00000474568 TARSP26639 723 aaKnown RBP16.97■□□□□ 0.31
ITGB1-210ENST00000474568 YWHAQP27348 245 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 KPNA1P52294 538 aaPredicted RBP16.97■□□□□ 0.31
ITGB1-210ENST00000474568 SLC5A3P53794 718 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 TNK2Q07912 1038 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 FCHO2Q0JRZ9 810 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 CLEC17AQ6ZS10 378 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 PJA1Q8NG27 643 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 FBXO32Q969P5 355 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 CYFIP2Q96F07 1278 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 HEXIM2Q96MH2 286 aaKnown RBP16.97■□□□□ 0.31
ITGB1-210ENST00000474568 TTLL2Q9BWV7 592 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 LTB4R2Q9NPC1 389 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 FAM86C1Q9NVL1 165 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 OBP2AQ9NY56 170 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 GTSE1Q9NYZ3 720 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 COQ4Q9Y3A0 265 aa16.97■□□□□ 0.31
ITGB1-210ENST00000474568 ZNF840PA6NDX5 716 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 ARNTLO00327 626 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 USP17L7P0C7H9 530 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 GLULP15104 373 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 HDCP19113 662 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 WEE1P30291 646 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 PLA2G5P39877 138 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 PTPN5P54829 565 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 CUL2Q13617 745 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 ARHGAP29Q52LW3 1261 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 TRIM68Q6AZZ1 485 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 ZNF852Q6ZMS4 543 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 CCDC105Q8IYK2 499 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 SLITRK1Q96PX8 696 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 MED15Q96RN5 788 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 DDX23Q9BUQ8 820 aaKnown RBP16.96■□□□□ 0.31
ITGB1-210ENST00000474568 KCNH6Q9H252 994 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 GKN1Q9NS71 199 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 THG1LQ9NWX6 298 aaKnown RBP16.96■□□□□ 0.31
ITGB1-210ENST00000474568 EHD2Q9NZN4 543 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 GCNT4Q9P109 453 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 CHORDC1Q9UHD1 332 aaPredicted RBP16.96■□□□□ 0.31
ITGB1-210ENST00000474568 RWDD2AQ9UIY3 292 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 ZMYM5Q9UJ78 669 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 KMT2EQ8IZD2 1858 aa16.96■□□□□ 0.31
ITGB1-210ENST00000474568 SHISA7A6NL88 538 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 TNFRSF10BO14763 440 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 RTN3O95197 1032 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-210ENST00000474568 GNA14O95837 355 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 NHLH1Q02575 133 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 KCNH2Q12809 1159 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 PPP1R26Q5T8A7 1209 aaPredicted RBP16.95■□□□□ 0.3
ITGB1-210ENST00000474568 FOXR2Q6PJQ5 311 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 GPRIN1Q7Z2K8 1008 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 TRIM59Q8IWR1 403 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 SLC4A11Q8NBS3 891 aa16.95■□□□□ 0.3
ITGB1-210ENST00000474568 SH3RF2Q8TEC5 729 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms