RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 TCTN3Q6NUS6 607 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 KLHDC10Q6PID8 442 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 SLC39A5Q6ZMH5 540 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 CHST15Q7LFX5 561 aaPredicted RBP2.76□□□□□ -1.97
CALD1-216ENST00000473714 ANKRD23Q86SG2 305 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 C1orf210Q8IVY1 113 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 ADHFE1Q8IWW8 467 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 RHOT1Q8IXI2 618 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 DRC7Q8IY82 874 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 SH2D3CQ8N5H7 860 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 CDYL2Q8N8U2 506 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 ARRDC4Q8NCT1 418 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 MYRIPQ8NFW9 859 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 NRG4Q8WWG1 115 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 GJA10Q969M2 543 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 COA7Q96BR5 231 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 GNRHR2Q96P88 292 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 TBCBQ99426 244 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 MPHOSPH9Q99550 1183 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 C7orf25Q9BPX7 421 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 DEFB129Q9H1M3 183 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 MEGF9Q9H1U4 602 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 MTG2Q9H4K7 406 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 ARMT1Q9H993 441 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 PTPRHQ9HD43 1115 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 SLC39A2Q9NP94 309 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 KLHL11Q9NVR0 708 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 FTSJ1Q9UET6 329 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 NOL12Q9UGY1 213 aaKnown RBP eCLIP2.76□□□□□ -1.97
CALD1-216ENST00000473714 NIP7Q9Y221 180 aaKnown RBP eCLIP2.76□□□□□ -1.97
CALD1-216ENST00000473714 ATP11BQ9Y2G3 1177 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 PCDHB6Q9Y5E3 794 aa2.76□□□□□ -1.97
CALD1-216ENST00000473714 RALGAPA2Q2PPJ7 1873 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 WDR87Q6ZQQ6 2873 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 A0A1W2PPL8 197 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PRR5-ARHGAP8B1AHC4 643 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 H3BML4 177 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ELL2O00472 640 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 TNPO2O14787 897 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 KIAA0355O15063 1070 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 TBX3O15119 743 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ARHGAP6O43182 974 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 DAPK3O43293 454 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 B3GALT2O43825 422 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 AKR1B10O60218 316 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PRAMEF4O60810 478 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 A1BGP04217 495 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ZKSCAN1P17029 563 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 ITGB6P18564 788 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 MAKP20794 623 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 COMTP21964 271 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 BMP5P22003 454 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 FBLP22087 321 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 APEX1P27695 318 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 AOAHP28039 575 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 HTR3AP46098 478 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 GLRBP48167 497 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PIP4K2AP48426 406 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 USP14P54578 494 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 KRTAP10-11P60412 298 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ARHGAP8P85298 464 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 SIGLEC14Q08ET2 396 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 NFATC3Q12968 1075 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 MALLQ13021 153 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 SNAPC2Q13487 334 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ANO6Q4KMQ2 910 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 INO80DQ53TQ3 878 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 ZBTB41Q5SVQ8 909 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 AGBL4Q5VU57 503 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 ZNF530Q6P9A1 599 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 CCDC174Q6PII3 467 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 B3GNT9Q6UX72 402 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 NPNTQ6UXI9 565 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 UNQ6494/PRO21346Q6UXR6 183 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 GADL1Q6ZQY3 521 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 OTOP2Q7RTS6 562 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 TTC7BQ86TV6 843 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 MIB1Q86YT6 1006 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 GLB1L2Q8IW92 636 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 CCDC33Q8N5R6 958 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 NEK9Q8TD19 979 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PNISRQ8TF01 805 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 LRTOMTQ8WZ04 291 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 LARP4BQ92615 738 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 RGMAQ96B86 450 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 PGBD4Q96DM1 585 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 CDK5RAP3Q96JB5 506 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 CLIC6Q96NY7 704 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 LMF1Q96S06 567 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 CGRRF1Q99675 332 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 FOXB1Q99853 325 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 HERPUD2Q9BSE4 406 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 NAA15Q9BXJ9 866 aaKnown RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 TEX13AQ9BXU3 409 aaPredicted RBP2.75□□□□□ -1.97
CALD1-216ENST00000473714 B3GNT5Q9BYG0 378 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 NYXQ9GZU5 481 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 TMEM60Q9H2L4 133 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 MMRN2Q9H8L6 949 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 KIAA1586Q9HCI6 787 aa2.75□□□□□ -1.97
CALD1-216ENST00000473714 INCENPQ9NQS7 918 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms