RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ECI2O75521 394 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 F11P03951 625 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 ASGR2P07307 311 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 CD19P15391 556 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 GJA1P17302 382 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 NPR3P17342 541 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 SLC9A1P19634 815 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 RFX1P22670 979 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 YWHAQP27348 245 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 MAP3K7CLP57077 242 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 HTR4Q13639 388 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 KRT31Q15323 416 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 PPP1R26Q5T8A7 1209 aaPredicted RBP15.04■□□□□ -0
BRCA1-211ENST00000472490 ARHGAP17Q68EM7 881 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 ARHGEF19Q8IW93 802 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 PDZD8Q8NEN9 1154 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 EDAQ92838 391 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 ELSPBP1Q96BH3 223 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 ASB16Q96NS5 453 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 KCNK16Q96T55 309 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 FUCA2Q9BTY2 467 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 TTLL2Q9BWV7 592 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 DUSP16Q9BY84 665 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 FBXO44Q9H4M3 255 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 TAB2Q9NYJ8 693 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 TRPM5Q9NZQ8 1165 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 NUMBLQ9Y6R0 609 aa15.04■□□□□ -0
BRCA1-211ENST00000472490 LRRC10BA6NIK2 292 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 KRT5P13647 590 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 PFKLP17858 780 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 ACO1P21399 889 aaKnown RBP15.03■□□□□ -0
BRCA1-211ENST00000472490 WEE1P30291 646 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 AVPR1AP37288 418 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 SLC5A3P53794 718 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 CACNA2D1P54289 1103 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 ZXDAP98168 799 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 NCAPHQ15003 741 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 ZSCAN23Q3MJ62 389 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 FAM78AQ5JUQ0 283 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 PARM1Q6UWI2 310 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 SLC44A3Q8N4M1 653 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 UBR7Q8N806 425 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 ANKRD52Q8NB46 1076 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 RBBP8NLQ8NC74 664 aaPredicted RBP15.03■□□□□ -0
BRCA1-211ENST00000472490 STKLD1Q8NE28 680 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 OVCA2Q8WZ82 227 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 FGF14Q92915 247 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 C1QTNF1Q9BXJ1 281 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 UBXN6Q9BZV1 441 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 VPS16Q9H269 839 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 TRPV4Q9HBA0 871 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 LIMA1Q9UHB6 759 aaKnown RBP15.03■□□□□ -0
BRCA1-211ENST00000472490 DUSP12Q9UNI6 340 aa15.03■□□□□ -0
BRCA1-211ENST00000472490 TCF20Q9UGU0 1960 aaKnown RBP15.02■□□□□ -0
BRCA1-211ENST00000472490 DPYSL4O14531 572 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 MED7O43513 233 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 ZNF18P17022 549 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 NFKBIBQ15653 356 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 CLEC20AQ6ZU45 233 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 MON1AQ86VX9 555 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 DEPDC1BQ8WUY9 529 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 ZSWIM3Q96MP5 696 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 KREMEN1Q96MU8 473 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 SMOQ99835 787 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 TMEM30AQ9NV96 361 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 OBP2AQ9NY56 170 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 TSPAN16Q9UKR8 245 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 CNTN6Q9UQ52 1028 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 DAAM1Q9Y4D1 1078 aa15.02■□□□□ -0
BRCA1-211ENST00000472490 DENND4AQ7Z401 1863 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 NCANO14594 1321 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 TRAV19A0A0A6YYK7 116 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 TNFRSF10BO14763 440 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 BEST1O76090 585 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 SRFP11831 508 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 COPB1P53618 953 aaKnown RBP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 BCAT1P54687 386 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 CYP4F8P98187 520 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 PFKPQ01813 784 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 SIGLEC14Q08ET2 396 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 BST2Q10589 180 aaKnown RBP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 IFRD2Q12894 506 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 TAF10Q12962 218 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 CNGA2Q16280 664 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 ARHGAP44Q17R89 818 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 FILIP1LQ4L180 1135 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 LCLAT1Q6UWP7 414 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 TMEM150AQ86TG1 271 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 ARID3BQ8IVW6 561 aaPredicted RBP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 DHX40Q8IX18 779 aaKnown RBP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 CMTM8Q8IZV2 173 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 MAB21L3Q8N8X9 362 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 ZMIZ2Q8NF64 920 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 RSAD2Q8WXG1 361 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 KHSRPQ92945 711 aaKnown RBP eCLIP15.01□□□□□ -0.01
BRCA1-211ENST00000472490 KAT5Q92993 513 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 FBXO32Q969P5 355 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 SLC46A2Q9BY10 475 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 IL37Q9NZH6 218 aa15.01□□□□□ -0.01
BRCA1-211ENST00000472490 DNAJC12Q9UKB3 198 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms