RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 ZNF626Q68DY1 528 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 SWSAP1Q6NVH7 229 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 KIRREL2Q6UWL6 708 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 DPY19L3Q6ZPD9 716 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 Q6ZWC4 215 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 GAS2L3Q86XJ1 694 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 RAVER1Q8IY67 606 aaKnown RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 MPP5Q8N3R9 675 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 SLC15A4Q8N697 577 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 OR6B3Q8NGW1 331 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 RP9Q8TA86 221 aaKnown RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 CYP2W1Q8TAV3 490 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 SLC35G2Q8TBE7 412 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 OSCP1Q8WVF1 389 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 KBTBD7Q8WVZ9 684 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 XAGE5Q8WWM1 108 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 MAML1Q92585 1016 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 RUNDC1Q96C34 613 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 PUS7Q96PZ0 661 aaKnown RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 MESP1Q9BRJ9 268 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 DPH1Q9BZG8 443 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 MS4A7Q9GZW8 240 aaPredicted RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 ATP6V0A4Q9HBG4 840 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 CCNL1Q9UK58 526 aaPredicted RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 GABRQQ9UN88 632 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 THRAP3Q9Y2W1 955 aaKnown RBP1.81□□□□□ -2.12
UBXN4-207ENST00000471246 SNX14Q9Y5W7 946 aa1.81□□□□□ -2.12
UBXN4-207ENST00000471246 FER1L4A9Z1Z3 1794 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CAPN8A6NHC0 703 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 FAM227AF5H4B4 570 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 H7C1Q1 480 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 MYO1FO00160 1098 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 BTN3A1O00481 513 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TBX3O15119 743 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TP73O15350 636 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PRPF3O43395 683 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TUSC2O75896 110 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 USP1O94782 785 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PDE8BO95263 885 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 FAM163BP0C2L3 166 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PRR35P0CG20 571 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 XRCC6P12956 609 aaKnown RBP eCLIP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 KCNA3P22001 575 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 FPR3P25089 353 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CERS1P27544 350 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 MPGP29372 298 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SLC7A1P30825 629 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 DGKEP52429 567 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PRKAG1P54619 331 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TUBA4AP68366 448 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 GPSM2P81274 684 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SSBP2P81877 361 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 E2F1Q01094 437 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CTBP1Q13363 440 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 RAB32Q13637 225 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 KLF9Q13886 244 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 MLC1Q15049 377 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PLEKHG6Q3KR16 790 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SUPT20HL1Q3ZLR7 823 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SLC44A4Q53GD3 710 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PLA1AQ53H76 456 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 MTX3Q5HYI7 312 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CERCAMQ5T4B2 595 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 DCAF12L1Q5VU92 463 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SLC9A4Q6AI14 798 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 FCRL6Q6DN72 434 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CXorf57Q6NSI4 855 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 NPNTQ6UXI9 565 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TRIM72Q6ZMU5 477 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PARS2Q7L3T8 475 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 MAEAQ7L5Y9 396 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 YTHDF3Q7Z739 585 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 NEK8Q86SG6 692 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CAND1Q86VP6 1230 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CHSY1Q86X52 802 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 ABRAQ8N0Z2 381 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PNLDC1Q8NA58 520 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 ZBTB8BQ8NAP8 495 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 IL31RAQ8NI17 732 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 BPIFB1Q8TDL5 484 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TMEM171Q8WVE6 324 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 RAPGEF4Q8WZA2 1011 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 DAZAP1Q96EP5 407 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 RITA1Q96K30 269 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 LENG8Q96PV6 779 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PPP1R10Q96QC0 940 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PRR25Q96S07 402 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SH2D3AQ9BRG2 576 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 THAP7Q9BT49 309 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 C22orf23Q9BZE7 217 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SEMA4CQ9C0C4 833 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 SMURF2Q9HAU4 748 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 NRIP3Q9NQ35 241 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TRMT13Q9NUP7 481 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 CAMSAP3Q9P1Y5 1249 aaPredicted RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 NOB1Q9ULX3 412 aaKnown RBP1.8□□□□□ -2.12
UBXN4-207ENST00000471246 PAXBP1Q9Y5B6 917 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 ZNF804BA4D1E1 1349 aa1.8□□□□□ -2.12
UBXN4-207ENST00000471246 TRIM43BA6NCK2 446 aa1.79□□□□□ -2.12
UBXN4-207ENST00000471246 MBD3L4A6NDZ8 208 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms