RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 STK33Q9BYT3 514 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 TINAGL1Q9GZM7 467 aaPredicted RBP6.67□□□□□ -1.34
CKS1B-204ENST00000471245 XYLT2Q9H1B5 865 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 AGO4Q9HCK5 861 aaKnown RBP6.67□□□□□ -1.34
CKS1B-204ENST00000471245 LUZP4Q9P127 313 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 HDAC5Q9UQL6 1122 aa6.67□□□□□ -1.34
CKS1B-204ENST00000471245 MEGF6O75095 1541 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 CDHR4A6H8M9 788 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PRR5-ARHGAP8B1AHC4 643 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PYCARD-AS1I3L0S3 204 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 GRPP07492 148 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 INHBBP09529 407 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PIM1P11309 404 aaPredicted RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 GNAT2P19087 354 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 MGAT1P26572 445 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 SLC11A2P49281 568 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 ZNF135P52742 658 aaPredicted RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PSMC1P62191 440 aaKnown RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 BLMHQ13867 455 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 UTP14CQ5TAP6 766 aaKnown RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 XYLT1Q86Y38 959 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 CPXCR1Q8N123 301 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 FITM2Q8N6M3 262 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 SPATA5Q8NB90 893 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PCSK9Q8NBP7 692 aaKnown RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 IPCEF1Q8WWN9 437 aaPredicted RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 EVI5LQ96CN4 794 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PLA2G12BQ9BX93 195 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.66□□□□□ -1.34
CKS1B-204ENST00000471245 MEGF9Q9H1U4 602 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 GSTO2Q9H4Y5 243 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 ZCCHC4Q9H5U6 513 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 SLC45A2Q9UMX9 530 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 CEP83Q9Y592 693 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 EVC2Q86UK5 1308 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 CCDC88AQ3V6T2 1871 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 PXDNLA1KZ92 1463 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
CKS1B-204ENST00000471245 HNRNPDLO14979 420 aaKnown RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 FFAR2O15552 330 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 IPO13O94829 963 aaKnown RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 IL1R1P14778 569 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 CHKAP35790 457 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 CARSP49589 748 aaKnown RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 PUM3Q15397 648 aaKnown RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 CRB2Q5IJ48 1285 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 NT5DC1Q5TFE4 455 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 SLFN13Q68D06 897 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 EFCAB12Q6NXP0 572 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 TTLL10Q6ZVT0 673 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 SMIM5Q71RC9 77 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 PPP1R32Q7Z5V6 425 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 SMAP1Q8IYB5 467 aaPredicted RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 TXLNBQ8N3L3 684 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 ZNF527Q8NB42 609 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 TMIEQ8NEW7 156 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 OR52N2Q8NGI0 321 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 ZNF566Q969W8 418 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 SCLT1Q96NL6 688 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 ISCA1Q9BUE6 129 aa6.65□□□□□ -1.34
CKS1B-204ENST00000471245 MAGED2Q9UNF1 606 aaPredicted RBP6.65□□□□□ -1.34
CKS1B-204ENST00000471245 KCPQ6ZWJ8 1503 aa6.65□□□□□ -1.35
CKS1B-204ENST00000471245 GOLGA6L3A6NEY3 463 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 AREL1O15033 823 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 TLR5O60602 858 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 SKAP2O75563 359 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 AGFG2O95081 481 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 TXNP10599 105 aaKnown RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 MYL4P12829 197 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 PAX3P23760 479 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 WNT3P56703 355 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 FSTL1Q12841 308 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 GRM7Q14831 915 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 CSRP2Q16527 193 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 DCAF17Q5H9S7 520 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 DCAF12L1Q5VU92 463 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 UNC13DQ70J99 1090 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 RNF44Q7L0R7 432 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 USP37Q86T82 979 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 C16orf71Q8IYS4 520 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 DNERQ8NFT8 737 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 ST8SIA2Q92186 375 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 CCT6BQ92526 530 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 KLHL32Q96NJ5 620 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 LRRC37BQ96QE4 947 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 CPPED1Q9BRF8 314 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 CNPPD1Q9BV87 410 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 SPATA5L1Q9BVQ7 753 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 TM7SF3Q9NS93 570 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 HECAQ9UBI9 543 aaPredicted RBP6.64□□□□□ -1.35
CKS1B-204ENST00000471245 TMX2Q9Y320 296 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 DGKBQ9Y6T7 804 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 C4AP0C0L4 1744 aa6.64□□□□□ -1.35
CKS1B-204ENST00000471245 M0QYG6 137 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 MYO1CO00159 1063 aa6.63□□□□□ -1.35
CKS1B-204ENST00000471245 LAMTOR5O43504 91 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms