RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 NT5C1AQ9BXI3 368 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 SRRTQ9BXP5 876 aaKnown RBP15.03■□□□□ -0
TOP3B-215ENST00000470338 BRD9Q9H8M2 597 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 EHD2Q9NZN4 543 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 RWDD2AQ9UIY3 292 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 F5P12259 2224 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 CHADO15335 359 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 PI15O43692 258 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 GDI1P31150 447 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 ORC1Q13415 861 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 MLF2Q15773 248 aaPredicted RBP15.02■□□□□ -0
TOP3B-215ENST00000470338 TRIM59Q8IWR1 403 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 CELF5Q8N6W0 485 aaKnown RBP15.02■□□□□ -0
TOP3B-215ENST00000470338 C12orf29Q8N999 325 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 SMARCD1Q96GM5 515 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 KCNK16Q96T55 309 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 HNRNPABQ99729 332 aaKnown RBP15.02■□□□□ -0
TOP3B-215ENST00000470338 PRRX2Q99811 253 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 MED10Q9BTT4 135 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 NUP62CLQ9H1M0 184 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 TBC1D17Q9HA65 648 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 CSNK1G1Q9HCP0 422 aa15.02■□□□□ -0
TOP3B-215ENST00000470338 COL4A3Q01955 1670 aa15.02□□□□□ -0.01
TOP3B-215ENST00000470338 ARNTLO00327 626 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 DPYSL4O14531 572 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 TNFRSF10BO14763 440 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF263O14978 683 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 P4HA2O15460 535 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 FGFR1OPO95684 399 aaKnown RBP15.01□□□□□ -0.01
TOP3B-215ENST00000470338 CCDC130P13994 396 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 CD58P19256 250 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 TRIM21P19474 475 aaKnown RBP15.01□□□□□ -0.01
TOP3B-215ENST00000470338 AVPR1AP37288 418 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 PPP3CCP48454 512 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF268Q14587 947 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-215ENST00000470338 NUP93Q8N1F7 819 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 ZMIZ2Q8NF64 920 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 SLC2A14Q8TDB8 520 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 USP13Q92995 863 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-215ENST00000470338 SMOQ99835 787 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 DMAP1Q9NPF5 467 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-215ENST00000470338 CISHQ9NSE2 258 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 TDP1Q9NUW8 608 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 IL37Q9NZH6 218 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 GCNT4Q9P109 453 aa15.01□□□□□ -0.01
TOP3B-215ENST00000470338 KANSL1LA0AUZ9 987 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 SHISA7A6NL88 538 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 STK25O00506 426 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 AP1G2O75843 785 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 BEST1O76090 585 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 RTN3O95197 1032 aaPredicted RBP15□□□□□ -0.01
TOP3B-215ENST00000470338 PFKLP17858 780 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 MLLT6P55198 1093 aaPredicted RBP15□□□□□ -0.01
TOP3B-215ENST00000470338 KCNH2Q12809 1159 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 ARHGAP29Q52LW3 1261 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 YAF2Q8IY57 180 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 LMO3Q8TAP4 145 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 BPIFB1Q8TDL5 484 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 CYFIP2Q96F07 1278 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 SLC22A12Q96S37 553 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 CYP2S1Q96SQ9 504 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 ARID3AQ99856 593 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 DNAI2Q9GZS0 605 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 SMG9Q9H0W8 520 aaKnown RBP15□□□□□ -0.01
TOP3B-215ENST00000470338 KIF9Q9HAQ2 790 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 HEBP1Q9NRV9 189 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 KRT82Q9NSB4 513 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 FAM49BQ9NUQ9 324 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 COMMD8Q9NX08 183 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 TRPM5Q9NZQ8 1165 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 CCL26Q9Y258 94 aa15□□□□□ -0.01
TOP3B-215ENST00000470338 MYO16Q9Y6X6 1858 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 FAM92AA1XBS5 289 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 C2orf78A6NCI8 922 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 ZNF840PA6NDX5 716 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 USP17L7P0C7H9 530 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 CCDC192P0DO97 292 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 GLULP15104 373 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 YWHAQP27348 245 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 RAD23BP54727 409 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 TAF10Q12962 218 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 CUL2Q13617 745 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 UBR7Q8N806 425 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 SLC4A11Q8NBS3 891 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 PRSS33Q8NF86 280 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 PJA1Q8NG27 643 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 GPT2Q8TD30 523 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 OVCA2Q8WZ82 227 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 TMEM176AQ96HP8 235 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 OSBPL6Q9BZF3 934 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 DLGAP2Q9P1A6 1054 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 SIT1Q9Y3P8 196 aa14.99□□□□□ -0.01
TOP3B-215ENST00000470338 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.99□□□□□ -0.01
TOP3B-215ENST00000470338 TRAV19A0A0A6YYK7 116 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 GOLGA6L22H0YM25 854 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 GALR2O43603 387 aaPredicted RBP14.98□□□□□ -0.01
TOP3B-215ENST00000470338 FAM200BP0CF97 657 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 HDCP19113 662 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 RFX1P22670 979 aa14.98□□□□□ -0.01
TOP3B-215ENST00000470338 TBXAS1P24557 533 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms